PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN11592.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 689aa    MW: 76135.5 Da    PI: 8.887
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN11592.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.51.3e-28161220159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dg++WrKYGqK  k +++pr+YYrCt a +Cpv+++v+r+aed +++++tYeg+Hnh+
  KHN11592.1 161 MNDGCQWRKYGQKIAKRNPCPRAYYRCTVApTCPVRRQVQRCAEDLSILITTYEGTHNHP 220
                 58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-30147222IPR003657WRKY domain
SuperFamilySSF1182905.36E-26154222IPR003657WRKY domain
PROSITE profilePS5081126.9156222IPR003657WRKY domain
SMARTSM007748.1E-34161221IPR003657WRKY domain
PfamPF031062.8E-25162220IPR003657WRKY domain
Gene3DG3DSA:2.140.10.102.3E-18574658IPR027295Quinoprotein alcohol dehydrogenase-like domain
SuperFamilySSF509982.88E-15575661IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
PfamPF135701.8E-5609642IPR025666Pyrrolo-quinoline quinone-like domain
SMARTSM005649.1E-4623654IPR018391Pyrrolo-quinoline quinone beta-propeller repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    Send to blast
MGEVKEENER LKMMLERVEK DYHSLQLRFF DIHHEDVSKK GLADSSSCHD HETEELVSLC  60
LGRSPMVPKK EARIGNSNKL KEDVGPNLTL GLDSKHLLSM EVVSDFSPMN SSEQPKEAEE  120
EVTLSTNQSA KVINANDDMS DQMPAKRARV SVRARCDTPT MNDGCQWRKY GQKIAKRNPC  180
PRAYYRCTVA PTCPVRRQVQ RCAEDLSILI TTYEGTHNHP LPVSATAMAS TTSAAASMLL  240
SGSSTSHHPT NHNSASFGNA PTTLQSGLSF SHQFDESRTK QVFSPPNHAS LHMFPTITLD  300
MTYSASNSSS LTQFQHRLPS TMASISNLKF SPASLSCSQD NNFITSIWSK GGDTTTPPII  360
DKIPTRPVIK GNPYFQENFY QQSITNQTPF KEALAETITK AISTDPSLRS VIAAAVSSIV  420
GIGSNSGNQE GAENVLGSGL NLKLGDHLQL ASSNPLNQNG KGCLTGYFKS LSSKNSEAGN  480
FIFLQPPLPF SFSKSGTNQL NHYNKYSEES NPKLAHHKEA SKVSKGYVST PTSKRKYWRS  540
RTPVFEPNPR NVLCMRKSSR NISSSPCGKA TCLGQQSQDW LNQGGDLYNR RYAYKERKIN  600
PETAPNLRLK WKFNAGKDIT ATSAIYNGTL YFPSWNGNIY AVKEGNGSLV WKQDLQNLTG  660
LNATGFVRSQ CKLDCVKDNS HCCWGFIDC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-19148222174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN11592.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028179814.10.0probable WRKY transcription factor 72
TrEMBLA0A445J5I10.0A0A445J5I1_GLYSO; Putative WRKY transcription factor 72
STRINGGLYMA09G37470.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-68WRKY DNA-binding protein 72
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]