PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN11422.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 368aa    MW: 40000.1 Da    PI: 4.3891
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN11422.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.7e-18119167254
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                 +++GVr++k +g+W+AeIrd +     + +r++lg+f taeeA +a++a r+++e
  KHN11422.1 119 KFRGVRQRK-WGKWAAEIRDpF-----QsTRIWLGTFNTAEEASQAYEARRLEFE 167
                 79******9.**********55.....45*******************9999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.5E-21119166IPR001471AP2/ERF domain
PfamPF008471.4E-11119168IPR001471AP2/ERF domain
PROSITE profilePS5103219.216119183IPR001471AP2/ERF domain
SuperFamilySSF541715.36E-16119166IPR016177DNA-binding domain
SMARTSM003801.9E-17119182IPR001471AP2/ERF domain
CDDcd000181.01E-22119166No hitNo description
PRINTSPR003673.1E-10120131IPR001471AP2/ERF domain
PRINTSPR003673.1E-10142158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MPESRKQPAS RPKQKLHHHS LQESKAMRKL RIICDDPDAT DSSEDETEKV QSPRRVKRNV  60
SEISLPPLPP PFTTTPETSS CEVNSGKNAT LKGFIEGQPQ SKKRVLTHPP STRRNTSGKF  120
RGVRQRKWGK WAAEIRDPFQ STRIWLGTFN TAEEASQAYE ARRLEFEAMA EAQAYKTSSV  180
SEPLATISDN KSNCCNSSAA AISAAAVSAA DVSVSEKFST TFDDLEESVL SHNSPSSVLE  240
LDTLASKSLE KGNVSTEEAI EANDLVAELA GLEVPDVSLL NLLPPPSDSG GAAAAVSSGI  300
EPNFGLDFDW LSFNDYGQGF DDFGGLEDIH IGGFDDNEPT ELPDFDFGDF GADEFAGWIE  360
EPLNIPCA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-111181601356Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN11422.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006605899.20.0ethylene-responsive transcription factor ERF118
RefseqXP_014628315.10.0ethylene-responsive transcription factor ERF118
RefseqXP_014628316.10.0ethylene-responsive transcription factor ERF118
RefseqXP_028221609.10.0ethylene-responsive transcription factor ERF118-like
RefseqXP_028221610.10.0ethylene-responsive transcription factor ERF118-like
TrEMBLI1NFI50.0I1NFI5_SOYBN; Uncharacterized protein
STRINGGLYMA20G24920.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-26ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]