PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN10070.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family C2H2
Protein Properties Length: 175aa    MW: 19473.8 Da    PI: 4.8785
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN10070.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000452343323
                ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                C  C+++F++   L +H  +H
  KHN10070.1 23 CRLCNQVFTDTQALLTHVESH 43
                99***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.3282148IPR007087Zinc finger, C2H2
PROSITE patternPS0002802343IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MANNFYNNAQ FAGFYNNTNP KGCRLCNQVF TDTQALLTHV ESHMAQEEDS LRRLNSSPPD  60
VNSQMQLGSQ QFPPQPAMGD GRNFQAQSQP MRMPQPISKN PIFNSSQIGS SSTPIRQMQV  120
SPQAFPFSGS INGDGSKPYI SKLEKPIKKI DFIDLVNMDG DDNLEVEAMD LDLKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN10070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358711e-139AC235871.2 Glycine max clone GM_WBb0132A17, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145903.11e-53hypothetical protein PHAVU_007G277300g
TrEMBLA0A0B2PLR21e-125A0A0B2PLR2_GLYSO; Uncharacterized protein
STRINGGLYMA10G00655.11e-125(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1527958
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]