PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN09555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | WRKY | ||||||||
Protein Properties | Length: 195aa MW: 22165.2 Da PI: 6.6741 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 6.2e-29 | 110 | 168 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++pr+YY+C+ +gC vkk+ver+++d ++v +tY g Hnh+ KHN09555.1 110 MDDGYKWRKYGKKTVKSSPNPRNYYKCSGEGCDVKKRVERDRDDSNYVLTTYDGVHNHQ 168 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-30 | 97 | 170 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.19E-27 | 102 | 170 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.469 | 105 | 170 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.5E-31 | 110 | 169 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-22 | 111 | 168 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
MDYYFGNLNP NPYYHHSAVV NMASPSSEFM LSDYLVLEDA LVVDHHQESW SQSTETESSE 60 KATSSDASHG FGDATSTNTN IKCQNSGIKG KNAEVSQRIT FRTRSQLEVM DDGYKWRKYG 120 KKTVKSSPNP RNYYKCSGEG CDVKKRVERD RDDSNYVLTT YDGVHNHQTP STAYYSQMPL 180 LHSNHDWALH PFANS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-23 | 98 | 170 | 2 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN09555.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU019590 | 0.0 | EU019590.1 Glycine max WRKY61 (WRKY61) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001348333.1 | 1e-142 | WRKY transcription factor 51 | ||||
Refseq | XP_028236361.1 | 1e-142 | probable WRKY transcription factor 51 | ||||
TrEMBL | A0A445K9S4 | 1e-141 | A0A445K9S4_GLYSO; Putative WRKY transcription factor 51 isoform A | ||||
TrEMBL | I1KBC5 | 1e-141 | I1KBC5_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA06G15220.1 | 1e-141 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1120 | 34 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 1e-34 | WRKY DNA-binding protein 51 |
Publications ? help Back to Top | |||
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