PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN09437.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | C2H2 | ||||||||
Protein Properties | Length: 133aa MW: 14999.4 Da PI: 9.5129 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.1 | 0.00062 | 22 | 44 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H KHN09437.1 22 FECKTCNRKFSSFQALGGHRASH 44 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.3 | 0.00024 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs L H+r+H KHN09437.1 70 HECSICGLEFSLGQALGGHMRKH 92 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 5.4E-11 | 22 | 46 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.19 | 22 | 44 | IPR015880 | Zinc finger, C2H2-like |
SuperFamily | SSF57667 | 8.64E-9 | 22 | 92 | No hit | No description |
PROSITE profile | PS50157 | 10.699 | 22 | 49 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 24 | 44 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 8.1E-10 | 70 | 94 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.15 | 70 | 92 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.12 | 70 | 92 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 72 | 92 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MLFSCPIESN KTQQKSFGSV EFECKTCNRK FSSFQALGGH RASHKRQKLE GEELKEQAKS 60 LSLWNKPKMH ECSICGLEFS LGQALGGHMR KHRASLNEGF PIIPSIDQVI AKIPVLKRSN 120 STRVMCLDLE LHL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN09437.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT091700 | 0.0 | BT091700.1 Soybean clone JCVI-FLGm-8J5 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001235663.1 | 3e-94 | C2H2-type zinc finger protein | ||||
Refseq | XP_028225726.1 | 3e-94 | zinc finger protein ZAT11-like | ||||
Swissprot | Q9SLD4 | 1e-29 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A445LCV7 | 7e-93 | A0A445LCV7_GLYSO; Zinc finger protein ZAT11 | ||||
TrEMBL | C6T2P1 | 7e-93 | C6T2P1_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA03G33070.1 | 1e-93 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF316 | 34 | 175 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 4e-32 | C2H2 family protein |