PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN07752.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 259aa    MW: 28910 Da    PI: 6.3756
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN07752.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.3e-1373119354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+Er+RR+riN  +++Lr+++P a      K++Ka+ L ++++++k+L
  KHN07752.1  73 KSHSEAERKRRARINAHLDTLRSVIPGA-----MKMDKASLLGEVIRHLKEL 119
                 58*************************9.....7****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.01870119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.75E-1273121No hitNo description
Gene3DG3DSA:4.10.280.102.1E-1373122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-1073119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-1374123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-1276125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048737.57E-7158200No hitNo description
Gene3DG3DSA:3.30.70.2604.1E-5158200No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MEMEDFLWGG GIDEDVTKRK SDGFEGSNGV IGSGWCGSSF SLVLDRERGE LVEEPVRLEK  60
KGVSTERSIE ALKSHSEAER KRRARINAHL DTLRSVIPGA MKMDKASLLG EVIRHLKELK  120
KNAAQACEGL MIPKDNDEIS VEEQEGGLNG FPYSIRASLC CEYKPGLLSD IKQALDALHL  180
MITRADIATL EGRMKNVFVI ISCKEQNFED AAYRQFLAVS VHQALKSVLN RFSVSEDILG  240
TRKRRRISIF SSSSLEDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241245RKRRR
2242246KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN07752.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0937010.0BT093701.1 Soybean clone JCVI-FLGm-17L23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003527389.10.0transcription factor bHLH30
RefseqXP_028238036.10.0transcription factor bHLH30-like
TrEMBLA0A0B2PJM20.0A0A0B2PJM2_GLYSO; Transcription factor bHLH30
TrEMBLI1KES70.0I1KES7_SOYBN; Uncharacterized protein
STRINGGLYMA06G43560.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.19e-31bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]