PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN07672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 350aa MW: 39166.2 Da PI: 4.5984 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.6 | 1.5e-10 | 277 | 317 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq KHN07672.1 277 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVNYVKFLQ 317 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.49E-14 | 267 | 331 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.288 | 267 | 316 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.4E-12 | 272 | 326 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.6E-11 | 273 | 322 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 9.37E-12 | 276 | 321 | No hit | No description |
Pfam | PF00010 | 8.5E-8 | 277 | 317 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0016787 | Molecular Function | hydrolase activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence Send to blast |
MEPAGAFPDG EWDFFRRIFA GEDHEHDLFT PQFPLLLDGD DELNIVTQPT FCAAPEVGEN 60 ERMFYSLDAH HSNSSQYISQ ESSHSNSSNC SGDDTIFIAN PGSTNYYFSY PDHVLANNAC 120 VYSMDEKYFA SFVPSLADIV TEESVKLHED VASDDRLENS ECNQMEPIVF PSKQLQLKRK 180 LDVPAEDKMN KGSENQKKRA RALKDGQGCM KNTWSKKNQK HASNGEEAEE TNAGSDGQSS 240 SSNMSEDDNI SKSALNSNGK TRASRGSATD PQSLYARKRR ERINERLRIL QNLVPNGTKV 300 DISTMLEEAV NYVKFLQLQI KLLSSDDLWM YAPLAYNGLD IGLNLNSLSL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN07672.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028198711.1 | 0.0 | transcription factor bHLH85-like | ||||
TrEMBL | A0A0B2PJB9 | 0.0 | A0A0B2PJB9_GLYSO; Transcription factor bHLH84 | ||||
TrEMBL | K7M5P8 | 0.0 | K7M5P8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G09781.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF807 | 33 | 121 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 2e-42 | bHLH family protein |
Publications ? help Back to Top | |||
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