PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN07348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 140aa MW: 16505.5 Da PI: 9.1997 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15 | 4.5e-05 | 26 | 50 | 10 | 32 |
HHHHHHHHHHHHHHHCTSCC.C... CS HLH 10 rrRRdriNsafeeLrellPk.as.k 32 r+RR+++N++++ L +++P+ + KHN07348.1 26 RNRRKKLNERLFVLGSVVPNiSKhL 50 9******************966343 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.22E-5 | 25 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.8E-4 | 26 | 49 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MMRPCRVLQL VSLHWWAYKE ILLPKRNRRK KLNERLFVLG SVVPNISKHL QEQEKIIQAE 60 IMELELGIPK KCASYDFELE QLPVVLWSNK KITEHLYDSQ KDTDTVVKLC EVFESLKVKI 120 VTANITSFSD RLLKTSFIEF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN07348.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027356216.1 | 2e-47 | transcription factor bHLH35-like isoform X1 | ||||
Swissprot | Q2HIV9 | 2e-20 | BH035_ARATH; Transcription factor bHLH35 | ||||
TrEMBL | A0A371G946 | 3e-46 | A0A371G946_MUCPR; Transcription factor bHLH35 | ||||
STRING | GLYMA09G06770.1 | 1e-46 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.3 | 2e-15 | bHLH family protein |
Publications ? help Back to Top | |||
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