PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06202.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 343aa    MW: 38775.5 Da    PI: 5.3496
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06202.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.74.7e-29168255291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fYn+YA+evGF vr+sk ++s+r+g+ + rt+vC+keg+r  +k++  k  r+raetr+gC+a+++v+k ++gkw+v+k+++eH+H+l+p
  KHN06202.1 168 FYNAYATEVGFIVRVSKLSRSRRDGTAIGRTLVCNKEGFRMADKRE--KIVRQRAETRVGCRAMIMVRKLSSGKWVVAKFVKEHTHPLTP 255
                 ******************************************9988..9**************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.3E-26168255IPR004330FAR1 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MRDNLGETEN EVEYENLRAK EALLMLRNNE VALVEEQVFL FCVVVFFVLY CVGGVVVQHE  60
TEDRKIISGI THRFHHDLIF MEVEIDGSVT VETVGNTAIG EVSSIADDNR EGGSSVEPND  120
NQDQHDNGTQ DSSGGITIPS AIPTVSVVSV EEPYVGQEFG SEAAAHAFYN AYATEVGFIV  180
RVSKLSRSRR DGTAIGRTLV CNKEGFRMAD KREKIVRQRA ETRVGCRAMI MVRKLSSGKW  240
VVAKFVKEHT HPLTPGKGRR DFYYEQYPTE QDKIRELSQQ LATEKKRSAA YKRHLELIFE  300
QIEEQNDNLS KKIQHIVDCV KEMEAKEEHS RQCEGDGSQR TTE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN06202.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944940.0BT094494.1 Soybean clone JCVI-FLGm-18B16 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003537936.10.0protein FAR1-RELATED SEQUENCE 6 isoform X2
RefseqXP_028190112.10.0protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A0B2PF490.0A0A0B2PF49_GLYSO; Protein FAR1-RELATED SEQUENCE 5
STRINGGLYMA12G05600.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.24e-87FAR1 family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]