PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN05832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 273aa MW: 30702.7 Da PI: 5.9986 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.00028 | 109 | 143 | 17 | 55 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 N+ f+ Lr llP++ ps + a++ + A +YIk L+ KHN05832.1 109 NEMFDDLRGLLPQL---PS-EADEATVIKVAANYIKGLE 143 99***********8...54.5667************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.57E-6 | 107 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.25E-4 | 109 | 147 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.8E-5 | 109 | 151 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS51671 | 8.558 | 200 | 273 | IPR002912 | ACT domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence Send to blast |
MYHSPIFLLN PKTKPLSLSF FLFLFLSTLM AEDQGSHAID FHLGNHLLVS SNSDNSGESK 60 NNMKPLNQQN EEGEALVNKK RNREIASENE KDNITSDEGL DGKHPESNNE MFDDLRGLLP 120 QLPSEADEAT VIKVAANYIK GLEESRKRLG KITKRMFPYV FKEIMGTSDT ILINGKKKLE 180 FDKVWTSSNM VLNIHANWAQ FTVCSAYKPH LLNTITSVLE RHNIEVIAAN VSFNHNENGK 240 TCMILVHAKQ VSDENSAEET YKDASGEIFS LIS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN05832.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003518700.2 | 0.0 | uncharacterized protein GMZOU-2 | ||||
Refseq | XP_028183988.1 | 0.0 | uncharacterized protein LOC114370798 | ||||
TrEMBL | A0A0B2PE22 | 0.0 | A0A0B2PE22_GLYSO; Uncharacterized protein | ||||
TrEMBL | K7K7I9 | 0.0 | K7K7I9_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA02G11490.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF35076 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 5e-06 | bHLH family protein |
Publications ? help Back to Top | |||
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