PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN05831.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 264aa    MW: 29627.5 Da    PI: 6.5108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN05831.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.7e-1267114455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h   Er RR+++++ f+ L  llP++   p  K +K++++ +Av YIk+L+
  KHN05831.1  67 MHIWTERERRKKMRNMFASLHALLPHL---P-SKADKSTVVDEAVAYIKNLE 114
                 56678*********************6...3.8****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.89E-1261118No hitNo description
SuperFamilySSF474596.02E-1563126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.75163113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-1566127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-968114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-871119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MNFLWENHSW DPSNSDNSGE SKENMKSLDQ VEEKDEALMN KKRNRDQGNI TSGEGKGEKC  60
RESDHEMHIW TERERRKKMR NMFASLHALL PHLPSKADKS TVVDEAVAYI KNLEKTLEKL  120
EKQKQERVQC VSTFGCEPSM FVTGQGSSNN NISNAIIGTT SNALSFPVAF DKTWASSNLV  180
LNIFGDEAQF SICTAHKPGL MTTIGFVLEK YKIEVITANI SCIGYGNACM IQAHGKRVSH  240
QFLDANSVEE IYKQAAGEIM LWIG
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN05831.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028183999.10.0transcription factor bHLH95
TrEMBLA0A445LM620.0A0A445LM62_GLYSO; Transcription factor bHLH95
STRINGGLYMA02G11500.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-23bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]