PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN04443.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 313aa    MW: 35099 Da    PI: 6.0073
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN04443.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-092372771055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+ri +++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  KHN04443.1 237 RKRRERIDDRLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 277
                 9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.922227276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-13229292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.7E-12232286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.7E-10233282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.53E-10236281No hitNo description
PfamPF000101.4E-6237277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MLANEAHYCS PQLLEEDDGN VGMQSMFCST LDVGGNKNMF YSFDSHNSSL QYISQESSHN  60
NSTCCGHSVF MANPEDHTNY HFGHVDHVLA NSTSMDFCMI DEKNPGSFVQ SDIVMKENAS  120
LNEDEGSDKS ENVFPAKHLK FKRMSDHMPE LKVHVEDKIN SHGNGNKKPR VSKDEQHCMK  180
NQKLDKIGNQ AEEINAGSDG HSSSSYTRED DNASALNFKG KTKASKGATD PQSLYARKRR  240
ERIDDRLRIL QNLVPNGTKV DISTMLEEAV QYVKFLQLQN KLLSSDDLWM YAPIAYNGLD  300
LVLNLNPKSS PPL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN04443.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028226992.10.0transcription factor bHLH85-like
TrEMBLK7KI250.0K7KI25_SOYBN; Uncharacterized protein
STRINGGLYMA04G04801.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.15e-41ROOT HAIR DEFECTIVE 6-LIKE 2
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]