PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN04418.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 277aa    MW: 30918.4 Da    PI: 6.1758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN04418.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.9e-11185233355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L+el+P +    +kK  Ka +L + ++Y++sLq
  KHN04418.1 185 NSHSLAERVRREKISERMRLLQELVPGC----DKKTGKAVMLDEIINYVQSLQ 233
                 58*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.98E-11180237No hitNo description
SuperFamilySSF474598.77E-19180251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.425182232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-18183251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-8185233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12188238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MVSHSEFANS AYPSVLENQG MNCDSHFVQY VSDSNFEHMA LKVPSFGQTG SYDIANTGYL  60
PNHNPSNESG MERSPINNEQ SKLEGSTSEE GAAPDEHKRK RGLDYNFTFS SNKNAEGEAL  120
KDSSGKSCDD DVKEQCEKKP RVAQNSTANL CGKQLLKQKK DDSESEEGSK ENFIHVRARR  180
GQATNSHSLA ERVRREKISE RMRLLQELVP GCDKKTGKAV MLDEIINYVQ SLQQQVEFLS  240
MKLATVNPQL NFNVEQICSK DVSVGLYNLL TKVLVQS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN04418.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014629957.10.0transcription factor bHLH74 isoform X1
RefseqXP_028227756.10.0transcription factor bHLH74-like isoform X1
TrEMBLA0A445KVN40.0A0A445KVN4_GLYSO; Transcription factor bHLH74 isoform B
TrEMBLK7KI450.0K7KI45_SOYBN; Uncharacterized protein
STRINGGLYMA04G05091.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2654123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-51bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]