PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN03874.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 133aa    MW: 15083.8 Da    PI: 4.8859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN03874.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-151561150
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50
                ++y+GVr+++ +g+++AeIrdp     + +r++lg+f taeeA +aa ++r
  KHN03874.1 15 PRYRGVRRRP-WGKFAAEIRDPAR---HgARVWLGTFLTAEEADRAAYEMR 61
                68********.**********943...24*****************98877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.99E-231571No hitNo description
PfamPF008471.2E-101561IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.8E-251672IPR001471AP2/ERF domain
PROSITE profilePS5103218.4791670IPR001471AP2/ERF domain
SMARTSM003804.1E-271676IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-171671IPR016177DNA-binding domain
PRINTSPR003673.9E-101728IPR001471AP2/ERF domain
PRINTSPR003673.9E-104056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MEEESKEKRD TKGEPRYRGV RRRPWGKFAA EIRDPARHGA RVWLGTFLTA EEADRAAYEM  60
RGALAVLNFP NEYPSCSSMS SSSTLAPSSS SSNSMLKNDH GKQVIEFECL DDKLLEDLLD  120
CDDYAYEKDL PKN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-291611414114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN03874.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003536938.17e-58ethylene-responsive transcription factor ERF096
RefseqXP_028182620.17e-58ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC52e-35ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A445IHH22e-56A0A445IHH2_GLYSO; Ethylene-responsive transcription factor ERF098
TrEMBLI1L8D22e-56I1L8D2_SOYBN; Uncharacterized protein
STRINGGLYMA10G04160.13e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2236524
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-29ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]