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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
KHN03530.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
GRAS |
| Protein Properties |
Length: 545aa MW: 60881.5 Da PI: 6.5015 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| KHN03530.1 | genome | TCUHK | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 409.5 | 3.2e-125 | 177 | 545 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
+L cA+avs++d a+ + + l +l+s +gdp+qRl ay++e+L+arl +s++ +yk+l++++ + s+e +++++++++++P+ kf+++ aN
KHN03530.1 177 ALKVCAQAVSDDDVPTARGWIDNvLGKLVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLKCEQPT---SKELMSYMHILYQICPYWKFAYISANAI 272
6888**************9997527888***************************************9...99999*********************** PP
GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
I e +++e+r+HiiDf+i qG+QW L+qaLa Rp+gppslR+Tgv++++s+ + l +gerL++fA+++gvpfef+ +a + ++ +++++
KHN03530.1 273 IQETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSThaRGGGLWIVGERLSDFARSCGVPFEFHS-AAISGCEVVRGNIEIRA 370
************************************************9988888999***********************.56666777799****** PP
GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
gEalaVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s+++ pr++++ri+ E+++++r+ vn+
KHN03530.1 371 GEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTFVEQESNTNTSPFFQRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDMVNM 469
*************************************************************************************************** PP
GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+aceg er+erhe ++kWr+rl++aGFk+ +ls++++ ++ ll++++++ yr+e+++g+l+lgW++r + + SaWr
KHN03530.1 470 IACEGVERVERHELFGKWRSRLSMAGFKQCQLSSSVMVAIQNLLKEFSQN-YRLEHRDGALYLGWMNRHMATSSAWR 545
************************************************66.*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 545 aa
Download sequence Send
to blast |
MQTSQKHPSS AGAHFYHQPV QGIYQMLQSN LCQDSSSQGT SVSFETCKEQ YFTLESCPAP 60
TNDFMDCDDS PSYASVSSKR TPFSPQGSQS CYSDHHQSSD NTYGSPISGL SSVDDRHQLK 120
HKLRELEISL LAPEESDITD SCGCCVVKGG LHGSSQLAKH NWDQIAENIA QFDLKGALKV 180
CAQAVSDDDV PTARGWIDNV LGKLVSVSGD PIQRLGAYLL EGLRARLESS GNLIYKSLKC 240
EQPTSKELMS YMHILYQICP YWKFAYISAN AIIQETMANE SRIHIIDFQI AQGTQWHLLI 300
QALAHRPGGP PSLRVTGVDD SQSTHARGGG LWIVGERLSD FARSCGVPFE FHSAAISGCE 360
VVRGNIEIRA GEALAVNFPY VLHHMPDESV STENHRDRLL RLVKSLSPKV VTFVEQESNT 420
NTSPFFQRFV ETLDYYTAMF ESIDVACPRD DKKRISAEQH CVARDMVNMI ACEGVERVER 480
HELFGKWRSR LSMAGFKQCQ LSSSVMVAIQ NLLKEFSQNY RLEHRDGALY LGWMNRHMAT 540
SSAWR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
