PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01621.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 381aa    MW: 43056.5 Da    PI: 7.7064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01621.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68e-12193239455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er+RR+++ ++f  L   +P +     kK +Ka iL++A+ Y+k+Lq
  KHN01621.1 193 DHIMAERKRRRELTERFIALSATIPGL-----KKTDKAYILREAITYMKQLQ 239
                 599************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.386189238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-15193251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-16194253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9194239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.24E-10194243No hitNo description
SMARTSM003531.3E-12195244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MEDSWQNWIS SLEMGDDNSN GQSHINSLDQ DKLLTGIVLE PEPPNFSFHQ SVHHHHSSTM  60
SQNNHHHSNN NVLVPTTSTM GSSTLSYDED ASFDERHGKM LKCNSSNSIT ISQDIVANSQ  120
IPSKSTFILS FENSTVEPAL HDRPNYNNSP KHFEATCSSL LSSEITLNSD YIITKSEAKQ  180
GAKKHRTSSE IKDHIMAERK RRRELTERFI ALSATIPGLK KTDKAYILRE AITYMKQLQE  240
RVKELENENK RKTTYSRIFI KKSQVCSREE ATSSCETNSY RSTPPLPQVE ARVLENEVLI  300
GIHCQKQKDI VLKIMALLQS FHLSLASSSV LPFGTSTLKV TIIAQMGDKY GMAVNDLVKT  360
LRQDLLKSHD IQKSYSKECQ I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198202RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN01621.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583521.10.0transcription factor bHLH18
RefseqXP_028240095.10.0transcription factor bHLH18-like
TrEMBLA0A0B2NWU60.0A0A0B2NWU6_GLYSO; Transcription factor bHLH19 isoform A
TrEMBLK7L1570.0K7L157_SOYBN; Uncharacterized protein
STRINGGLYMA07G13511.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14989811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.12e-44bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]