PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01614.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 294aa    MW: 33346 Da    PI: 8.0077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01614.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.5e-12139184555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h ++Er+RR++i   f  L  l+P +     kK++Ka++L  A+e++k+Lq
  KHN01614.1 139 HIMAERKRRENISRLFIALSALIPGL-----KKMDKASVLYNAIEHVKYLQ 184
                 889***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.183134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-16138198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.01E-11139188No hitNo description
Gene3DG3DSA:4.10.280.105.2E-17139199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-9139184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-13140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MDEPWLKWVS ILDTNDYHLS TECDMNSVEE PLEGENSVDP GELSWENHSP NSYLTKERTT  60
LLSNSSSLEE INTSFDMTSL KQHASPQKPK SCILSFEDST SVPITSKKTC QLYHGEHSKE  120
TQEELPNRKP LKRDTSFDHI MAERKRRENI SRLFIALSAL IPGLKKMDKA SVLYNAIEHV  180
KYLQQRVKDL EKDNKKRKTE SVGCFKINKT NVADNVWTCD DKPIKICPKV EARVSGKDVV  240
IRVTCEKQKN ILPKLLAKLE AHNLSIVCSN VLPFGNSALS ITSIAKEKDN TSLK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN01614.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028240112.10.0transcription factor bHLH25-like
TrEMBLA0A0B2P2990.0A0A0B2P299_GLYSO; Transcription factor bHLH25
STRINGGLYMA07G13406.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1634849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-41bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]