PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN01297.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 280aa    MW: 30934.4 Da    PI: 9.678
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN01297.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.3e-1099143554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h + Er+RR+++ ++f  L   +P +     kK +Ka+iL +A+ ++k L
  KHN01297.1  99 HIMTERKRRRELTERFIALSATIPGL-----KKIDKATILSEAITHVKRL 143
                 8999**********************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.72594143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-1598168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.34E-999148No hitNo description
PfamPF000101.6E-799143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.7E-1599159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-10100149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MKSNSSNFIF SSQHAPPEKP STATVASPTA YILSFGDSTL VAATRQNYGG KQPYHEEVVV  60
GSGGVCLPSK GVSEKHDVEP TTANQTTKRS RSSAETLDHI MTERKRRREL TERFIALSAT  120
IPGLKKIDKA TILSEAITHV KRLKERVREL EEQCKRTKVE SVSFVHQRPH ITTDKGTTSG  180
AMNSDECCRT NEALPTVEAR VFKKDVLLRI HCKIQSGILI KILDHLNSLD LSTISNSVMP  240
FGSSTLDISI IAQMGDKFKV TMNDLVKNLR LALLQSSEVQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103107RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN01297.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028240666.10.0transcription factor bHLH18-like
TrEMBLA0A445JRB20.0A0A445JRB2_GLYSO; Transcription factor bHLH25
STRINGGLYMA07G03051.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1625679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-29bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]