PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN00748.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 357aa    MW: 38803.9 Da    PI: 7.5715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN00748.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.2e-20132181255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+t+e Aa+a+++a+++++g
  KHN00748.1 132 KYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTEEAAARAYDEAALRFRG 181
                 8********.**********7.....337*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.6E-33131190IPR001471AP2/ERF domain
PROSITE profilePS5103225.791132189IPR001471AP2/ERF domain
SMARTSM003804.6E-38132195IPR001471AP2/ERF domain
PfamPF008471.4E-14132181IPR001471AP2/ERF domain
CDDcd000185.09E-22132191No hitNo description
SuperFamilySSF541716.54E-23132190IPR016177DNA-binding domain
PRINTSPR003673.2E-11133144IPR001471AP2/ERF domain
PRINTSPR003673.2E-11155171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MVSALTHVVV SSGSGQRSTE WIQQSGFPMM SASSLSCLSS FSSPSSSGAS WVGHKRGREE  60
EESSSSHNMI QQQQQSAPRL FRNIGDFMVP SQGDSSSATE EAPTSTTTSV TAVATTVTET  120
PPPPGGGERR RKYRGVRQRP WGKWAAEIRD PHKAARVWLG TFDTEEAAAR AYDEAALRFR  180
GNRAKLNFPE NVRAVPPIQP FQATTRLTVS DSTTSQFRPL VTETPPFIQQ PQIQGSSDLI  240
RDYLQYSQLL QSDFQQQQIQ QQSPSSLLQQ LYYNAQLASL QSPSVLSSSP SFSSSVSPTP  300
FPLFSTSAQF SSASFPMFSS QQMGYFQLPE SCPPAGGVPE FPPSTWSGTS GQPPPSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A9e-23131192163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132ERRRKY
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN00748.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2353000.0AC235300.1 Glycine max strain Williams 82 clone GM_WBb0063F04, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014621193.10.0ethylene-responsive transcription factor ABR1 isoform X1
RefseqXP_028199565.10.0ethylene-responsive transcription factor ABR1-like
TrEMBLA0A445LL030.0A0A445LL03_GLYSO; Ethylene-responsive transcription factor ERF112
TrEMBLK7K7150.0K7K715_SOYBN; Uncharacterized protein
STRINGGLYMA02G08835.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-28ethylene response factor 110
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]