PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHN00414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 205aa MW: 23242.1 Da PI: 10.8822 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.3 | 3.6e-10 | 47 | 93 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR riN +e+Lr +lP+ K +Ka++L ++++ +k+L KHN00414.1 47 KKHSEAEKRRRMRINGQYETLRNILPNiI------KKDKASVLAETIKQVKEL 93 68*************************55......899999999999988887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.272 | 44 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.16E-7 | 47 | 98 | No hit | No description |
Pfam | PF00010 | 2.2E-7 | 47 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.54E-13 | 48 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.9E-13 | 48 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.2E-8 | 50 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 0.00131 | 137 | 198 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MQHVRNYYNS EPQMMRSSFS QPFISRTYKT SFLKPKSKAE IKVLAAKKHS EAEKRRRMRI 60 NGQYETLRNI LPNIIKKDKA SVLAETIKQV KELKKKVSKL EQDSSTNPSK DVVKFPSGAE 120 KLRLERCNIE EGLVKATLSC EDRPELMQLI SKAVGSANTK LVKAEIVSVG GRTRSVLWVQ 180 GLGNDGMGML KSHLRTALHK PRSFQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KHN00414.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028183600.1 | 1e-150 | transcription factor bHLH131-like | ||||
TrEMBL | A0A445LJE9 | 1e-149 | A0A445LJE9_GLYSO; Transcription factor bHLH131 | ||||
STRING | GLYMA02G04650.2 | 1e-149 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12611 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 8e-38 | bHLH family protein |
Publications ? help Back to Top | |||
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