PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM99698.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family HB-other
Protein Properties Length: 536aa    MW: 60454.5 Da    PI: 6.5148
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM99698.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.31.5e-193085257
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                +kR+  t+ ql++Le++++ n+yp++e++ eLA++l+Lte+q++ WF+ rR k+kk
  KHM99698.1 30 KKRRLKTPAQLKALEDFYNDNKYPTEEMKSELADELELTEKQISGWFCHRRLKDKK 85
                89****************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-201585IPR009057Homeodomain-like
PROSITE profilePS5007117.2652686IPR001356Homeobox domain
SuperFamilySSF466891.28E-172689IPR009057Homeodomain-like
SMARTSM003899.8E-202890IPR001356Homeobox domain
PfamPF000466.5E-173085IPR001356Homeobox domain
CDDcd000862.31E-173086No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    Send to blast
MHPSFSMLSL QLKVTELQSE ENKLSMEKNK KRRLKTPAQL KALEDFYNDN KYPTEEMKSE  60
LADELELTEK QISGWFCHRR LKDKKMLNDE VCANGRQDRS SGVIQDRGSG LVQDSCGSTK  120
HVHYRYLDPK EVESHGLYNH GFSAADITYG HKNHRYVEND SATDNTSSES SSSLQDRLLC  180
QGQDPYDMEP SSHVTPNGSL LPPNTKGANN MGHKPSGYLK VKGEIEHAAI TAVKKQLGKH  240
YREDGPLLSV EFDTIPPEAF ECQIADLANE AYYAANPALP NSPEVSAVKK QSSLSSRYDS  300
YFTKISSQDS QMVRGDFGSL HDSDFQDKKS HHDINQRRNF QSFTNPLPHK NSCLDFNADS  360
TGEASAYNNT KNCRKGTKHG FDGTRYDSGS NPSDHYEENN LVVNQTDSLL HGYENSNLKN  420
VQRGEYVKSK PSNSVHKSQV YLDTGERRGL NKRMAKEEKF DGDRKIKKQY RDPDEVRVLT  480
NEMTVAKWAK VDPLEQYDVK QSSVAELEPR KSQRSAAEMP SSFSEDETAE TSSSAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12934KKRRLK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHM99698.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028245798.10.0uncharacterized protein LOC114423292 isoform X3
TrEMBLA0A0R0J1J70.0A0A0R0J1J7_SOYBN; Uncharacterized protein
STRINGGLYMA08G41330.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57923051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.18e-74HB-other family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]