PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Gorai.013G266400.2 | ||||||||
Common Name | B456_013G266400, LOC105782089 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 306aa MW: 34305.2 Da PI: 8.9905 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.2 | 3e-12 | 236 | 280 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r rrk+kNRe+A rsR+RK+a+ eL +kv Le+ N +Lk e Gorai.013G266400.2 236 RRLRRKIKNRESAARSRARKQAYHNELVNKVSRLEEDNLKLKREK 280 5889**********************************9999774 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-7 | 232 | 299 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.542 | 234 | 279 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.3E-11 | 236 | 281 | No hit | No description |
SuperFamily | SSF57959 | 1.77E-9 | 236 | 283 | No hit | No description |
Pfam | PF00170 | 1.6E-10 | 236 | 281 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.75E-17 | 236 | 290 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 239 | 254 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence Send to blast |
MGIQTMGSQS NGQQSLLQPS PLVRQNSWYS LTLNEVENQL GNLGKPLGSM NLDELLDNVW 60 STELNPPLGM NNTESISSSS SSLQRQASLT LARALSGKTV DQVWSEIQQG QKRRYGEGIK 120 DQEREATLGE TTLEDFLVQA GLFVAETSLD PTMEFDNTRQ QSLPHQFGLS PTPSIGTLSD 180 TPMTRQKRDV FQKSIESSLP QQFGLSPTPS IGTLSDTPMT GRKRDAQDAF EKSIERRLRR 240 KIKNRESAAR SRARKQAYHN ELVNKVSRLE EDNLKLKREK EFDTKSQCET SETRYQLRRT 300 SSASF* |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012462031.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Refseq | XP_012462032.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
TrEMBL | A0A0D2U7K4 | 0.0 | A0A0D2U7K4_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.013G266400.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 2e-56 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Gorai.013G266400.2 |
Entrez Gene | 105782089 |
Publications ? help Back to Top | |||
---|---|---|---|
|