PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.013G172500.2 | ||||||||
Common Name | B456_013G172500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 223aa MW: 24753.7 Da PI: 5.645 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 179 | 213 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 kr +r NR +A+rsR RK+++i +Le+ v +L+ Gorai.013G172500.2 179 KRVKRILANRQSAQRSRVRKLQYISQLERSVTTLQ 213 8999***************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-10 | 179 | 213 | No hit | No description |
Pfam | PF00170 | 5.0E-9 | 179 | 214 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.86E-9 | 179 | 216 | No hit | No description |
CDD | cd14703 | 3.58E-18 | 180 | 213 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 182 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MAELPPKIPS ISQNWPSFPH DKMPSMANFF PSTITNHPSW VDEFLDFSSA RRGAHRRSMS 60 DSIAFLEQPL VEEECRDSNA MPMMTTTTVS NLNMFDRLDD DQLMSLFSDD VAVTMAAPAP 120 TVSSSNPSTP TSSNNEEKTA PSTDLQQPKN EPGEVESTRK LSASEAPPSS NGDSIIDPKR 180 VKRILANRQS AQRSRVRKLQ YISQLERSVT TLQVHIHTCI YL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012464256.1 | 1e-154 | PREDICTED: basic leucine zipper 34-like | ||||
Swissprot | Q9M2K4 | 4e-51 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A0D2W704 | 1e-162 | A0A0D2W704_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.013G172500.1 | 1e-154 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-47 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.013G172500.2 |
Publications ? help Back to Top | |||
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