PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.012G151300.2 | ||||||||
Common Name | B456_012G151300, LOC105780835 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 364aa MW: 40677.9 Da PI: 7.1108 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.9 | 2.1e-08 | 235 | 281 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ Gorai.012G151300.2 235 AQRSRGRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMEN 281 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0013 | 224 | 283 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.25E-5 | 228 | 281 | No hit | No description |
CDD | cd14703 | 1.27E-14 | 230 | 274 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.8E-8 | 235 | 277 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence Send to blast |
MANSKGSTNI RNLMFAGKHA LLPPKSPFPI ASPVYTDYIP NNVIGSKVIQ KSRVGSTYHQ 60 CTSSESHLIE EQPSWLDDLL NEPETPMYKG RHRRSSSDSF AFIDVSNAPN VDYGARDECR 120 YKSMISSPSW THQDFDHHNQ KDARVNSFHA NVNLVKQNNR AWDSTSLRES TFIQGLGSSC 180 TLEEPEAPPS TASEKKDSAE SASPNAKGSS EKKDNSHTKS SSSDTDSKRA KQQFAQRSRG 240 RKLQYIAELE RNVQALQAEG SEVSAELEFL NQQNLILSME NKALKQRLES LAQEQAIKYL 300 EQEVLEREIG RLRVMYQQQN QQQPSSSHQC SSSRDLDSQF ANLSLKHNDT SSSLDPITGP 360 VRI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012460807.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598-like | ||||
Swissprot | Q8W3M7 | 8e-65 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | A0A0D2V898 | 0.0 | A0A0D2V898_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.012G151300.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-100 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.012G151300.2 |
Entrez Gene | 105780835 |
Publications ? help Back to Top | |||
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