PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.012G014500.3 | ||||||||
Common Name | B456_012G014500, LOC105780548 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 342aa MW: 37432.8 Da PI: 5.6529 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.2e-10 | 153 | 202 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 kr++r + NR +A+rs ++K ++ eLe+kv++L++e ++L l + Gorai.012G014500.3 153 KRAKRIIANRRSATRSKEKKALYMSELERKVQTLQTEATTLSAHLTLFQR 202 9****************************************988876665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.0E-14 | 149 | 213 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.002 | 151 | 214 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-8 | 153 | 212 | No hit | No description |
SuperFamily | SSF57959 | 1.37E-9 | 153 | 207 | No hit | No description |
Pfam | PF00170 | 1.1E-8 | 153 | 200 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.01E-21 | 154 | 203 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence Send to blast |
MQDPRNLNPN PDPAFPSFTQ NMPSFSNPAQ YRGSYHRRAQ SEVQFRIPDD LDLVSDPFEG 60 LGSEDDMLCS YMDIEMPGES AKGVEAAAGS WSQNPKGEEV SGGSGIGEKY NGGGKGRHRY 120 SNSVDGCSIM ESIEAKKAMA PDKLAELWTI DPKRAKRIIA NRRSATRSKE KKALYMSELE 180 RKVQTLQTEA TTLSAHLTLF QRDTTGLTTE NAELKLRLQA MEQQAQLSDA LNEALKKEVE 240 RLKTATGEIT TPTDTFNLGM HHISYAQSSF FPPQNTQLPP FHPFHSNLLT SSLNTNSHAL 300 ADMMQQDPLG LLQGLDTSSR GSPFVKSESP SICAAESSGT V* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gra.515 | 0.0 | seedling |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Ubiquitous. Strongly expressed in mature pollen. {ECO:0000269|PubMed:27896439}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012460397.1 | 0.0 | PREDICTED: transcription factor RF2b-like | ||||
Swissprot | O22873 | 1e-107 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | A0A0D2V0I4 | 0.0 | A0A0D2V0I4_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.012G014500.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 1e-98 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.012G014500.3 |
Entrez Gene | 105780548 |