PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.011G036300.3 | ||||||||
Common Name | B456_011G036300 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | BES1 | ||||||||
Protein Properties | Length: 286aa MW: 30533.1 Da PI: 8.8637 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 203.9 | 4.8e-63 | 2 | 127 | 1 | 126 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g sasasp+ Gorai.011G036300.3 2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIMGGSASASPC 92 5899*************************************************************************************** PP DUF822 92 sslqsslkssalaspvesysaspksssfpspssld 126 ss++ s+ ss+++sp++s + ++ + ++s + Gorai.011G036300.3 93 SSYHPSPGSSSFPSPASSHYTANANGNADANSLIP 127 ****8888888888887776666665555554444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 7.0E-60 | 3 | 133 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RKGCKPVDRM DIMGGSASAS PCSSYHPSPG SSSFPSPASS HYTANANGNA 120 DANSLIPWLK NLSSGSSSAS SKLAHHLFIA GGSISAPVTP PLSSPTSRTP RTRSDWDEMN 180 AGPTCTGKRF SYLPASTPPS PSRQVFPDPG GGSRMWTPGQ SGTCSPAFPA GVDQTSDVPM 240 SDAIAAEFAF GSNMTGLVKP WEGEKIHEEC VANDLELTLG NSKTR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012456862.1 | 1e-160 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1 | ||||
Refseq | XP_012456863.1 | 1e-160 | PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2 | ||||
Swissprot | Q9ZV88 | 1e-110 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A0D2VHQ8 | 0.0 | A0A0D2VHQ8_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.011G036300.1 | 1e-160 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 1e-86 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.011G036300.3 |
Publications ? help Back to Top | |||
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