PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.008G185500.3 | ||||||||
Common Name | B456_008G185500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | G2-like | ||||||||
Protein Properties | Length: 242aa MW: 27056 Da PI: 5.9921 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 34.7 | 3.9e-11 | 213 | 237 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+peLH+rF++a++qLGGs+ Gorai.008G185500.3 213 KQRRCWSPELHRRFLHALQQLGGSH 237 79*********************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.8E-8 | 210 | 236 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0055062 | Biological Process | phosphate ion homeostasis | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MIEMDYALKK RRCHEYVEAL EEERRKIQVF QRELPLCLEL VNQAIEAHKK EMSGGSTTTD 60 YMQGQSDCSE QTTSDVPVLE EFIPIKRSSN CSEEDDEQES HKSKETNVPA AVDKRKSDWL 120 RSVQLWNNNQ SPDLPLNEDD GKIGSAIEVK KNGGAFQPFQ KEKTVEMSGQ SAVGKTNGSA 180 TSTCTTESGS RGGEANNANK SKTEEKEGQA SRKQRRCWSP ELHRRFLHAL QQLGGSHGLC 240 Y* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00218 | DAP | Transfer from AT1G68670 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012438639.1 | 1e-177 | PREDICTED: transcription factor LUX-like | ||||
Swissprot | Q9FPE8 | 3e-72 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A0D2T2E9 | 1e-180 | A0A0D2T2E9_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.008G185500.1 | 1e-177 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 1e-74 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.008G185500.3 |
Publications ? help Back to Top | |||
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