PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.008G026300.3 | ||||||||
Common Name | B456_008G026300 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | G2-like | ||||||||
Protein Properties | Length: 297aa MW: 33699.2 Da PI: 8.9458 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 36.2 | 1.4e-11 | 264 | 288 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r++W+peLH+rFv+a++qLGGs+ Gorai.008G026300.3 264 KQRRCWSPELHRRFVNALQQLGGSQ 288 79*********************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.6E-9 | 262 | 288 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-7 | 264 | 286 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MGSVPPELSL DFRPTFVPKT ICTFLKEVSL IGNVPDKVSK LDAFVKRLEE EMRKIDAFKR 60 ELPLCMLLLN DAIVALKEES VQCMSRNVEP VLEEFIPLKN KKENNRSEED GALITNKKEK 120 DSNNNCNNNK DKKNWMSSVQ LWNTDDDYSS ISHKLDSKRK DGDSSQGCKN RGTATAFMPF 180 KMNLGFAVRK EEKEEIPVHG LTLLTPGIKN LKEESCSTGS RTSCSRAVSS SAPNAQSTFR 240 SVPQPLSHHQ QQQQQQQQQQ TARKQRRCWS PELHRRFVNA LQQLGGSQGE QMMFHW* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00193 | DAP | Transfer from AT1G49560 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012436209.1 | 0.0 | PREDICTED: uncharacterized protein LOC105762834 | ||||
TrEMBL | A0A0D2R7W5 | 0.0 | A0A0D2R7W5_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.008G026300.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37180.1 | 1e-26 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.008G026300.3 |
Publications ? help Back to Top | |||
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