PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.007G099100.2 | ||||||||
Common Name | B456_007G099100, LOC105802694 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | BES1 | ||||||||
Protein Properties | Length: 698aa MW: 78296.6 Da PI: 5.4055 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 143.7 | 1.6e-44 | 73 | 212 | 1 | 133 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas 87 gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ +gs+p ++++ ss+s Gorai.007G099100.2 73 GGARRSRPLEEKERTKLRERHRRAITARILAGLRKHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGSRPAgDSSAGLTSSSS 163 6899*****************************************************************9888899999755554444444 PP DUF822 88 ..aspesslq.sslkssalaspvesysaspksssfpspssldsislasa 133 s++ + + ++ +ss + ve ++ +k + +p p+ +d s+ ++ Gorai.007G099100.2 164 qmLSQQVPPTsLQGVSSGYCASVEYNACHMKGVFMPTPAPYDLSSSGHS 212 233333333336678999999*******************998876543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.1E-38 | 75 | 211 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 1.1E-180 | 254 | 691 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 6.3E-199 | 257 | 691 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 2.1E-103 | 263 | 683 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 294 | 308 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 315 | 333 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 337 | 358 | IPR001554 | Glycoside hydrolase, family 14 |
PROSITE pattern | PS00506 | 0 | 341 | 349 | IPR018238 | Glycoside hydrolase, family 14, conserved site |
PRINTS | PR00842 | 1.8E-8 | 420 | 429 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 5.4E-67 | 430 | 452 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 503 | 522 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 537 | 553 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 554 | 565 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 5.4E-67 | 572 | 595 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 1.8E-8 | 575 | 585 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 5.4E-67 | 612 | 634 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 1.8E-8 | 663 | 677 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00842 | 1.8E-8 | 678 | 692 | IPR001371 | Glycoside hydrolase, family 14B, plant |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 698 aa Download sequence Send to blast |
MSADMQKLIG ANEEDDEEEI EMDVKEEDNE DHENGQKHIA AQMMLGADGV MPSTSHQFQI 60 QQQLQEQVST PGGGARRSRP LEEKERTKLR ERHRRAITAR ILAGLRKHGN YNLRVRADIN 120 DVIAALAREA GWVVLPDGTT FPSRSQGSRP AGDSSAGLTS SSSQMLSQQV PPTSLQGVSS 180 GYCASVEYNA CHMKGVFMPT PAPYDLSSSG HSQSSGMVGN GGEQTESLPL IAGSMEVINE 240 QIIGLPPKLP ERDFAGTPYV PVYVMLPLGV VNMKCELVDP DGLLKQLRVL KSINVDGVMI 300 DCWWGIVEAD APQEYNWNGY RRLFQMVHEL KLKLQVVMSF HECGGNVGDD VCIPLPHWVA 360 EIGRSNPDIF FTDREGRRNT ECLSWGIDKE RVLRGRTAVE VYFDFMRSFR VEFNEFFEDG 420 IISMVEVGLG PCGELRYPSC PVKHGWRYPG IGEFQCYDQY MLKSLMKAAE MRGHSFWARG 480 PDNAGSYSSH PHETGFFCDE GDYDGYYGRF FLNWYSQLLI NHGDLVLSLA KLAFEGSCIA 540 AKLPGIHWWY KTSSHAAELT AGFYNPCNRD GYIAIAAMLH KHGAALNFAR AELQFLEQRE 600 DLQEALANPQ GLVWQVLNAA WETCITVVSE NAFVCHDRVG YNKILENVKP VNDPDGRHFS 660 SFTYLRLTPL LMERQNFMEF ERFVKRMHGE AVLYLQV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wds_A | 1e-153 | 259 | 690 | 11 | 444 | Beta-amylase |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012489940.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X2 | ||||
Swissprot | O80831 | 0.0 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A0D2QPV5 | 0.0 | A0A0D2QPV5_GOSRA; Beta-amylase | ||||
STRING | Gorai.007G099100.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 0.0 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.007G099100.2 |
Entrez Gene | 105802694 |
Publications ? help Back to Top | |||
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