PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.005G259700.5 | ||||||||
Common Name | B456_005G259700 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 247aa MW: 26699.7 Da PI: 8.2563 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.5 | 5.9e-08 | 214 | 236 | 4 | 26 |
XCHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKka 26 ++++r++kNRe+A rsR+RK+ Gorai.005G259700.5 214 QQKQKRMIKNRESAARSRERKQV 236 689******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-6 | 208 | 237 | No hit | No description |
Pfam | PF07716 | 7.7E-5 | 214 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 218 | 233 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MASSKVITTT SQTNPDVTRQ PSLCSSLSTL FADLQNQQNN NENRSQNCFG SMSMDDLLKN 60 IYPSTPPPPP STTGNTGSDA HHAQFLGGSI SREGSFSLPK DVASKSVDEV WKEIVAGGGD 120 QRQEGQLEEM TLEDFLTKAG AVREEDVSRG VVNQVSAGVF HVEPAVINGG GSQFSTFGNN 180 GGVDHQRLVV VPAGGGGRGK RRAVEEPPLD KATQQKQKRM IKNRESAARS RERKQVRHIL 240 LNWNLW* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012480546.1 | 1e-173 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A0D2NIB9 | 0.0 | A0A0D2NIB9_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G259700.1 | 1e-173 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 1e-17 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.005G259700.5 |
Publications ? help Back to Top | |||
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