PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.005G259700.2 | ||||||||
Common Name | B456_005G259700, LOC105795461 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 296aa MW: 32647.4 Da PI: 8.2432 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.7 | 7.1e-15 | 214 | 268 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++++r++kNRe+A rsR+RK+a++ eLe v Le+eN +L+ e el+ke k Gorai.005G259700.2 214 QQKQKRMIKNRESAARSRERKQAYTVELESMVTHLEEENARLRREEAELNKERFK 268 689****************************************999999998755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-12 | 211 | 275 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.8E-13 | 213 | 271 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.909 | 213 | 265 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 215 | 266 | No hit | No description |
CDD | cd14707 | 9.72E-22 | 215 | 262 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-14 | 216 | 268 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 218 | 233 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MASSKVITTT SQTNPDVTRQ PSLCSSLSTL FADLQNQQNN NENRSQNCFG SMSMDDLLKN 60 IYPSTPPPPP STTGNTGSDA HHAQFLGGSI SREGSFSLPK DVASKSVDEV WKEIVAGGGD 120 QRQEGQLEEM TLEDFLTKAG AVREEDVSRG VVNQVSAGVF HVEPAVINGG GSQFSTFGNN 180 GGVDHQRLVV VPAGGGGRGK RRAVEEPPLD KATQQKQKRM IKNRESAARS RERKQAYTVE 240 LESMVTHLEE ENARLRREEA ELNKERFKQL MEKLVPVDEK QRPRRVIRRA RSMEW* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012480546.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A0D2RTD3 | 0.0 | A0A0D2RTD3_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G259700.1 | 1e-177 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 3e-30 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.005G259700.2 |
Entrez Gene | 105795461 |
Publications ? help Back to Top | |||
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