PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.005G241600.4 | ||||||||
Common Name | B456_005G241600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 371aa MW: 41428.8 Da PI: 9.2371 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.4 | 1.3e-07 | 237 | 283 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+a+ ++ ele l+++ l +e+ Gorai.005G241600.4 237 AQRSRVRKLQYIAELERNVQALQAKGSEVSAELEFLNQQNLILSMEN 283 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0032 | 226 | 285 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 5.50E-15 | 230 | 276 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-5 | 237 | 279 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-6 | 237 | 280 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence Send to blast |
MANSKGSTNI RNFMVSGKHA LLPPKSPFPT VSPAYTDYVP NSVIGSKAVQ KPREGNTHHQ 60 RTSSESLRME EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYIDASNSPN LDYAAQDEFR 120 YQNMINTPSW ASQDARLSSL YSDVNLVKQN RAWDSSLNVM THPSRLPSLR ENTFLQSLGS 180 SCAPRELEGA LSTASEKQDS AESPPPDAKA SSEKKDNSHT KSSTCDGDSK RAKQQFAQRS 240 RVRKLQYIAE LERNVQALQA KGSEVSAELE FLNQQNLILS MENKALKQRL EGLAQEKAIK 300 HFEQEVLERE LSRLRALYQQ QQNQPQQQQQ LSSTHRRSSS RDLDSQFANL SLNNKDANSG 360 STPVTGPLRI * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012480294.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598 | ||||
Swissprot | Q8W3M7 | 2e-74 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | A0A0D2RKV7 | 0.0 | A0A0D2RKV7_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G241600.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 9e-96 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.005G241600.4 |
Publications ? help Back to Top | |||
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