PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.005G237400.2 | ||||||||
Common Name | B456_005G237400, LOC105795245 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 389aa MW: 41969.4 Da PI: 9.8989 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.9 | 2.5e-14 | 310 | 362 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r++r++kNRe+A rsR+RK+a++ eLe +v++L++ N++L k+ ee ++ + Gorai.005G237400.2 310 RRQKRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELLKKQEEVMEMQK 362 79****************************************99999988865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-12 | 306 | 371 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.461 | 308 | 359 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-12 | 310 | 362 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.41E-9 | 310 | 359 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-13 | 310 | 360 | No hit | No description |
CDD | cd14707 | 2.59E-25 | 310 | 364 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 313 | 328 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence Send to blast |
MGSHLNFKNF GGDGNNGSKP VVNSPLVRQS SIYSLTFDEL QSTFGGLGKD FGSMNMDELL 60 RNISTAEETQ SAMTASVSAG EGGDVSGGNL QKQGSLSLPR TLSQKTVDEV WKYLMKESDG 120 GSNDGSTGGE ANLPQRQQTL GTMTLEEFLA RAGVVREDMQ QIGMVNNGGF FADNSPLALG 180 FQQANTNNGF ASGVKSSSQL QQQPQPLFPK QQVVAFAPPM HLMNATQLAS PGAKGSVVGI 240 GDPSMNNNLV QNTGLQGGGM GIVGLGSPAS QISSDVVSKN SIDTTSPSPV PYIFGRGRKC 300 GANLEKVVER RQKRMIKNRE SAARSRARKQ AYTLELEAEV AKLKEMNQEL LKKQEEVMEM 360 QKNQMLEKVN RPWGRKRRCL RRTITCPW* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots and flowers. {ECO:0000269|PubMed:11884679}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012480227.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X2 | ||||
Swissprot | Q9M7Q3 | 1e-121 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A0D2PYJ0 | 0.0 | A0A0D2PYJ0_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G237400.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 4e-97 | abscisic acid responsive elements-binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.005G237400.2 |
Entrez Gene | 105795245 |