PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.005G237400.1 | ||||||||
Common Name | B456_005G237400, LOC105795245 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 407aa MW: 44115.9 Da PI: 9.5957 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.8 | 2.7e-14 | 328 | 380 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r++r++kNRe+A rsR+RK+a++ eLe +v++L++ N++L k+ ee ++ + Gorai.005G237400.1 328 RRQKRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELLKKQEEVMEMQK 380 79****************************************99999988865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-12 | 324 | 389 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.461 | 326 | 377 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.1E-13 | 328 | 378 | No hit | No description |
SuperFamily | SSF57959 | 9.85E-10 | 328 | 377 | No hit | No description |
Pfam | PF00170 | 2.0E-12 | 328 | 380 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.58E-25 | 328 | 382 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 331 | 346 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence Send to blast |
MEFIGQFDCG HNILLLWKMG SHLNFKNFGG DGNNGSKPVV NSPLVRQSSI YSLTFDELQS 60 TFGGLGKDFG SMNMDELLRN ISTAEETQSA MTASVSAGEG GDVSGGNLQK QGSLSLPRTL 120 SQKTVDEVWK YLMKESDGGS NDGSTGGEAN LPQRQQTLGT MTLEEFLARA GVVREDMQQI 180 GMVNNGGFFA DNSPLALGFQ QANTNNGFAS GVKSSSQLQQ QPQPLFPKQQ VVAFAPPMHL 240 MNATQLASPG AKGSVVGIGD PSMNNNLVQN TGLQGGGMGI VGLGSPASQI SSDVVSKNSI 300 DTTSPSPVPY IFGRGRKCGA NLEKVVERRQ KRMIKNRESA ARSRARKQAY TLELEAEVAK 360 LKEMNQELLK KQEEVMEMQK NQMLEKVNRP WGRKRRCLRR TITCPW* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots and flowers. {ECO:0000269|PubMed:11884679}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012480226.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X1 | ||||
Swissprot | Q9M7Q3 | 1e-120 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A0D2SMH3 | 0.0 | A0A0D2SMH3_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G237400.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 3e-96 | abscisic acid responsive elements-binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.005G237400.1 |
Entrez Gene | 105795245 |