PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.004G153100.4 | ||||||||
Common Name | B456_004G153100, LOC105791547 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 366aa MW: 39299.6 Da PI: 7.7381 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 71.9 | 9.3e-23 | 248 | 310 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN +L++e+++l+++++kl+ e+ Gorai.004G153100.4 248 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLEN 310 89*********************************************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.1E-34 | 1 | 93 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 3.8E-28 | 110 | 231 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-19 | 242 | 307 | No hit | No description |
Pfam | PF00170 | 4.2E-21 | 248 | 310 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 4.0E-22 | 248 | 312 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.748 | 250 | 313 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.31E-11 | 251 | 307 | No hit | No description |
CDD | cd14702 | 5.69E-23 | 253 | 302 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 255 | 270 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MGNNDEGKSK SDKSSSPVPT DQANIHVYPD WAAMQAYYGP RVTMPPYYNS AVASGHAPPP 60 YMWGPPQPMM PPYGAPYATI YSHGGVYAHP AVPITAAPVE APTKSSGNTE RGSTKKMKGF 120 DGLAMSIGNG TAENDEGAAE PRLSQSVETE GSTDGSDGNT TGTDQSRRKR SREGTPTIGG 180 DGKTEAKSNA VAVAEVTTTI SPKPIGTVLS PGMTTALELR NPSSMNAKSS PTNVPCGVMP 240 PEVWMQNERE LKRERRKQSN RESARRSRLR KQAETEELAR KVESLTAENA TLRSEINQLT 300 EKSEKLRLEN ATLVEGLKNA QLGHTQENIT NKNEDKEGEM YEKKSGAKLH QLLDASPRTD 360 AVAAS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 264 | 270 | RRSRLRK |
2 | 264 | 271 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012475105.1 | 0.0 | PREDICTED: common plant regulatory factor 1-like isoform X2 | ||||
Swissprot | Q99089 | 1e-132 | CPRF1_PETCR; Common plant regulatory factor 1 | ||||
TrEMBL | A0A0D2MYP5 | 0.0 | A0A0D2MYP5_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.004G153100.1 | 0.0 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 4e-93 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Gorai.004G153100.4 |
Entrez Gene | 105791547 |
Publications ? help Back to Top | |||
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