PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gorai.002G207000.2 | ||||||||
Common Name | B456_002G207000 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 262aa MW: 28168.8 Da PI: 9.0618 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.4 | 3e-08 | 206 | 233 | 4 | 31 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeL 31 +++rr++kNRe+A rsR+RK+ ++ L Gorai.002G207000.2 206 QQKQRRMIKNRESAARSRERKQVRLSFL 233 689*******************998766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-7 | 201 | 234 | No hit | No description |
CDD | cd14707 | 3.52E-13 | 207 | 246 | No hit | No description |
SuperFamily | SSF57959 | 6.38E-6 | 208 | 234 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 210 | 225 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MASSKVITTT SQTNPDLPRQ PSLCPSLSTL LADLQNQQNN QNQSQNGLGS MNMDDLLKNI 60 CSSPPPPPPT SDSHPQFAGV SISCEGSFSL PKDVANKSVD EVWKDIVVGG DDKRQGNPPV 120 GMTLEDFLTK AGAVREEDVR GVVNQVGVGA GVYPVDPAVI NGGGNHFSAF GNSGGVDHQR 180 LVAVAGGGAR GKRRAVEAPP LDKATQQKQR RMIKNRESAA RSRERKQVRL SFLKICLVAE 240 KMERNSTWFN VNPINCFFFQ L* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gra.1439 | 0.0 | flower| flowering |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 48800990 | 0.0 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016711655.1 | 1e-145 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 | ||||
Refseq | XP_017616076.1 | 1e-145 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 | ||||
TrEMBL | A0A0D2QGF1 | 0.0 | A0A0D2QGF1_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.002G207000.1 | 1e-141 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 1e-15 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Gorai.002G207000.2 |
Publications ? help Back to Top | |||
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