PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ56868.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

Nin-like

Protein Properties

Length: 878aa MW: 90412.9 Da PI: 7.75

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ56868.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	78.7	6.3e-25	392	441	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k++++edl+++F l +k+AA++Lg+c+T+LKr+CR++GIkRWP+R+i++l KXZ56868.1 392 KRLRFEDLQAQFGLGLKEAANNLGICATTLKRACRRHGIKRWPRRQIAKL 441 899********************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	15.983	376	461	IPR003035	RWP-RK domain
Pfam	PF02042	3.8E-20	394	441	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 878 aa Download sequence Send to blast
MAYNQLVGGL DLKQRLSKAL LDVSGSLASV KSGALVQGLP FSVAGVGDLL ALFRCVSVRY 60 RFSTDVMKPT LMGAIGRVYS TLEPEMSHNV QKYDKQVYLR VSEAQRCRVH STLMVPIFGC 120 GSRDTPLAVF ELVQGDRDVT FPAVMSHLFN ALQSVNLFTT DLETVASAAG LRKWPMHIDM 180 LPTAELVGGV GAGRLSPTRD EQQRAGNEGA EQKPAASSNI VATGLEGNAQ QIVSWLTTQG 240 ANGSVALGQL RALIEQQQQL QKQQAQAQAL KAEQAAMAAA GTVNGQAPMP PGAVPPVNGD 300 SPPTKNGLLA QIQQQQQQQA GWDLGASSAS AVMASNDKAN KLARSTSAPR ALGTDADDGD 360 GEDISSGGDD DDSDDERGGH RNNNRIGGGA GKRLRFEDLQ AQFGLGLKEA ANNLGICATT 420 LKRACRRHGI KRWPRRQIAK LSKALNQMGY SGAPPSGMVQ NAAVNGVGVS SATQAPAKPK 480 PAKKPDPAAL HQATQLFFQQ QLSAAAVAAN GGVFPNMAAA AAAQGMMMGA QVQVQGVPHG 540 MHMAMFAGAG GHIAQAAAAA AAAQQQQQQQ QQQQQQQQQQ HLQQQGVYQG GPFMGASMGA 600 TMGAAMMAQH AAHAAGMNGS MAPGAHMLLA NGMGGMHGMP GMAAMGAMQA GTVGGVQHSA 660 LSMQQLAAGG GAAGGAMHMQ AAGGNGLALQ GAPSGMLHPL LASTAGFQMQ QALQQQQQQQ 720 QQQQQLQHHQ QSMQAAQQLQ QAMQQPHQQG SGAGSMSQLG SGDRVGWLNQ GPASGGTMAT 780 AVSAGHTVGV SSSMDIVGPR PSCGDAPSPF SGLGMSPGFS GGAGDICLPE IPEEFLQNAM 840 GQSGAGMGQS GKSGNMGAGS IELMDFHGDL LGDDLATR

Sequence ? help Back to Top

Protein Sequence Length: 878 aa Download sequence Send to blast

MAYNQLVGGL DLKQRLSKAL LDVSGSLASV KSGALVQGLP FSVAGVGDLL ALFRCVSVRY  60
RFSTDVMKPT LMGAIGRVYS TLEPEMSHNV QKYDKQVYLR VSEAQRCRVH STLMVPIFGC  120
GSRDTPLAVF ELVQGDRDVT FPAVMSHLFN ALQSVNLFTT DLETVASAAG LRKWPMHIDM  180
LPTAELVGGV GAGRLSPTRD EQQRAGNEGA EQKPAASSNI VATGLEGNAQ QIVSWLTTQG  240
ANGSVALGQL RALIEQQQQL QKQQAQAQAL KAEQAAMAAA GTVNGQAPMP PGAVPPVNGD  300
SPPTKNGLLA QIQQQQQQQA GWDLGASSAS AVMASNDKAN KLARSTSAPR ALGTDADDGD  360
GEDISSGGDD DDSDDERGGH RNNNRIGGGA GKRLRFEDLQ AQFGLGLKEA ANNLGICATT  420
LKRACRRHGI KRWPRRQIAK LSKALNQMGY SGAPPSGMVQ NAAVNGVGVS SATQAPAKPK  480
PAKKPDPAAL HQATQLFFQQ QLSAAAVAAN GGVFPNMAAA AAAQGMMMGA QVQVQGVPHG  540
MHMAMFAGAG GHIAQAAAAA AAAQQQQQQQ QQQQQQQQQQ HLQQQGVYQG GPFMGASMGA  600
TMGAAMMAQH AAHAAGMNGS MAPGAHMLLA NGMGGMHGMP GMAAMGAMQA GTVGGVQHSA  660
LSMQQLAAGG GAAGGAMHMQ AAGGNGLALQ GAPSGMLHPL LASTAGFQMQ QALQQQQQQQ  720
QQQQQLQHHQ QSMQAAQQLQ QAMQQPHQQG SGAGSMSQLG SGDRVGWLNQ GPASGGTMAT  780
AVSAGHTVGV SSSMDIVGPR PSCGDAPSPF SGLGMSPGFS GGAGDICLPE IPEEFLQNAM  840
GQSGAGMGQS GKSGNMGAGS IELMDFHGDL LGDDLATR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002946865.1	1e-107	RWP-RK domain-containing transcription factor
TrEMBL	A0A150H4U6	0.0	A0A150H4U6_GONPE; NIT2 protein
STRING	XP_002946865.1	1e-107	(Volvox carteri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP3760	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	5e-13	Nin-like family protein