PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KXZ56731.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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Family | Nin-like | ||||||||
Protein Properties | Length: 296aa MW: 31671.3 Da PI: 9.9931 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 72.7 | 4.6e-23 | 19 | 68 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+ e l++ ++l+i++AA+eLg+++T LK CR +GI+RWP+Rk+ks+ KXZ56731.1 19 ASITKERLQQVYHLNIEEAARELGIGMTKLKEHCRTLGIPRWPSRKLKSM 68 789*********************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 17.859 | 1 | 88 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.5E-21 | 20 | 67 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MAARARKRSV RNGVCARIAS ITKERLQQVY HLNIEEAARE LGIGMTKLKE HCRTLGIPRW 60 PSRKLKSMDK LIESLNERAA TEPATKEVIA DILAEIESFK RAIYENPCLE VEEDIKRLRQ 120 SNFKKEYQQR QIEQRTRVGS SERSAGRAGS PGAAPFPPLH SGGSLDVLGS AGGLLGQSSL 180 SAGLPSLGPS FGSGLLQATP LQTTPSISGA GLPQQPQQGQ LSVLGTGQLQ QLLMGQGSQQ 240 LQQFMTQRAL GNVPPSSMLL PSMLSQPLPQ PLLKMPEPLS LGEPVAAGGE AAANDG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_001691825.1 | 1e-81 | RWP-RK transcription factor | ||||
TrEMBL | A0A150H3T5 | 0.0 | A0A150H3T5_GONPE; Uncharacterized protein | ||||
STRING | EDP04315 | 4e-81 | (Chlamydomonas reinhardtii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP84 | 16 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66990.1 | 1e-21 | RWP-RK domain-containing protein |