PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ56344.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

SBP

Protein Properties

Length: 1324aa MW: 133807 Da PI: 6.6274

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ56344.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	77.1	2.8e-24	66	141	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +C+v gC a l+ +k+y+ r +vCe h +a++++v+g+ rfCqqC+++ + ef +k+sC L++hn+r r k KXZ56344.1 66 VCEVLGCGASLEGLKRYYIRMRVCERHLNAQAIVVNGVVSRFCQQCAKWQFVGEFAGSKKSCIATLERHNARHRAK 141 6***********************************************************************9965 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.1100.10	1.4E-22	63	127	IPR004333	Transcription factor, SBP-box
PROSITE profile	PS51141	21.068	64	141	IPR004333	Transcription factor, SBP-box
SuperFamily	SSF103612	8.76E-23	65	140	IPR004333	Transcription factor, SBP-box
Pfam	PF03110	1.3E-24	67	140	IPR004333	Transcription factor, SBP-box

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1324 aa Download sequence Send to blast
MAGAPSGGMG APFDLGQDLL AAAVGAAAAG GGYLPLGGPD TDAGQEFGGL PVLETADRAD 60 PEPATVCEVL GCGASLEGLK RYYIRMRVCE RHLNAQAIVV NGVVSRFCQQ CAKWQFVGEF 120 AGSKKSCIAT LERHNARHRA KVLARQRDSP RADDAGGARG RGKGAKAGKA ADPTAAAATA 180 VRRRSAAAAA SSAVMDPCMQ GMAQLDGVAA HALASSDLSG GAAAVGGRGF DDVSGARVAA 240 AGAATAAELA FVQQQQPQGM AASAADVSAA PSKPASPNYY PYGGWDGANG TNGQLPAAGV 300 SIRPLVTTGG NGLVVAGERT GSGPLAAPSA RPGLPPQPPR PMAAPHWSEG WAGGRQLQAQ 360 GGPDFHPQLV GGSGMLQQQQ QPHQYHSHHH PHHQHPQQQQ QQWLGHARSA HQQLPPPPLD 420 VQRAMAAMPS LAAPHAQHHQ HQNQHHQQYQ QHMLRADPMY GDAGMYGAAV TTGVGGQTLL 480 HVRRDDSCSD GNTPVGSNAV GGGSGAGGAV SDSSGAHSQA TAKHAMMAAH APAREGSVGP 540 TLSGTSRSAA GPSASGAAGG TAMAANSPGT SSTEQDSAVR GSASASGSGY VGGDGGGAVS 600 GGAAGGGSQI GNVAARINSI MEELCPLIAQ FKQQVGPEAT RGSAGAAAGL AAAASSGSPA 660 LPPVVESAVA MMQQASQLAG SLAGQTSWGG AAAAHPQPGG AYSRPAAPPA GPGVWRPLQT 720 NPGIVVNVGA LAPSYSRPPA QGSAGPQQQP SQQLSQQPRQ QQQQQQATGF PAGQLAAGIE 780 GMAAAAVVAA PPPGYYAPAS SDSTAATAPY NSHNNGAAGP MYDGHQQQQY GGAGAGGARL 840 APAPPSGGLQ PMLGGSGVSG MVGEDADDEL LGQLLDFLDD PSDTELLFRQ QSMQNQQQLQ 900 YRGMAAAGQQ AVGAHQQAMQ ALHYGAPLRP LAWQPSLGAP VQPPTQQQQH PHQQQQHPQH 960 QQQQQQEQPN PFAAVAHGGL LVAQHSGGDS GGGSGLLAAD VSGGGVGGVP ELAGDDVDPR 1020 ELTRVSLKAM NVLPHELPPA LRANLRRWLK EARAEALQAT LRPGCLQLVV DVLRPASGPG 1080 CAPGEAASLL LMPHDPEQAA ADVFRILGQR LRDTYVQSLL PLAVLSGNGR GVDVLAAFAA 1140 EVLREPLRLD APQGPGGMSA LHLAALLPDG GALAAHLVAS QPWAAWAWLS LGWQPPVAAP 1200 EAPEAPAEAT DGTTAPKAEG LKAADDTNEE DKEGGEEDAE LPLPRPSTRL TPGSLSALLG 1260 QTEPLRRAAR LLQAGAALQR AGAERAGEMP DPATAALMGA VEAWGRTGAA LLSALCEQLG 1320 RTRL

Sequence ? help Back to Top

Protein Sequence Length: 1324 aa Download sequence Send to blast

MAGAPSGGMG APFDLGQDLL AAAVGAAAAG GGYLPLGGPD TDAGQEFGGL PVLETADRAD  60
PEPATVCEVL GCGASLEGLK RYYIRMRVCE RHLNAQAIVV NGVVSRFCQQ CAKWQFVGEF  120
AGSKKSCIAT LERHNARHRA KVLARQRDSP RADDAGGARG RGKGAKAGKA ADPTAAAATA  180
VRRRSAAAAA SSAVMDPCMQ GMAQLDGVAA HALASSDLSG GAAAVGGRGF DDVSGARVAA  240
AGAATAAELA FVQQQQPQGM AASAADVSAA PSKPASPNYY PYGGWDGANG TNGQLPAAGV  300
SIRPLVTTGG NGLVVAGERT GSGPLAAPSA RPGLPPQPPR PMAAPHWSEG WAGGRQLQAQ  360
GGPDFHPQLV GGSGMLQQQQ QPHQYHSHHH PHHQHPQQQQ QQWLGHARSA HQQLPPPPLD  420
VQRAMAAMPS LAAPHAQHHQ HQNQHHQQYQ QHMLRADPMY GDAGMYGAAV TTGVGGQTLL  480
HVRRDDSCSD GNTPVGSNAV GGGSGAGGAV SDSSGAHSQA TAKHAMMAAH APAREGSVGP  540
TLSGTSRSAA GPSASGAAGG TAMAANSPGT SSTEQDSAVR GSASASGSGY VGGDGGGAVS  600
GGAAGGGSQI GNVAARINSI MEELCPLIAQ FKQQVGPEAT RGSAGAAAGL AAAASSGSPA  660
LPPVVESAVA MMQQASQLAG SLAGQTSWGG AAAAHPQPGG AYSRPAAPPA GPGVWRPLQT  720
NPGIVVNVGA LAPSYSRPPA QGSAGPQQQP SQQLSQQPRQ QQQQQQATGF PAGQLAAGIE  780
GMAAAAVVAA PPPGYYAPAS SDSTAATAPY NSHNNGAAGP MYDGHQQQQY GGAGAGGARL  840
APAPPSGGLQ PMLGGSGVSG MVGEDADDEL LGQLLDFLDD PSDTELLFRQ QSMQNQQQLQ  900
YRGMAAAGQQ AVGAHQQAMQ ALHYGAPLRP LAWQPSLGAP VQPPTQQQQH PHQQQQHPQH  960
QQQQQQEQPN PFAAVAHGGL LVAQHSGGDS GGGSGLLAAD VSGGGVGGVP ELAGDDVDPR  1020
ELTRVSLKAM NVLPHELPPA LRANLRRWLK EARAEALQAT LRPGCLQLVV DVLRPASGPG  1080
CAPGEAASLL LMPHDPEQAA ADVFRILGQR LRDTYVQSLL PLAVLSGNGR GVDVLAAFAA  1140
EVLREPLRLD APQGPGGMSA LHLAALLPDG GALAAHLVAS QPWAAWAWLS LGWQPPVAAP  1200
EAPEAPAEAT DGTTAPKAEG LKAADDTNEE DKEGGEEDAE LPLPRPSTRL TPGSLSALLG  1260
QTEPLRRAAR LLQAGAALQR AGAERAGEMP DPATAALMGA VEAWGRTGAA LLSALCEQLG  1320
RTRL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150H2T8	0.0	A0A150H2T8_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP20	12	101

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	2e-16	SBP family protein