PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ55347.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

SBP

Protein Properties

Length: 737aa MW: 72203.8 Da PI: 6.8988

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ55347.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	45.3	2.2e-14	1	55	23	77
--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 23 vCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +C h +p+vl +g+ qrfCqqC + +l++fD +krsCr L+k +r r++ KXZ55347.1 1 MCAGHLLSPAVLKDGRLQRFCQQCCKLQDLDQFDGTKRSCRVALEKVRQRGRQRM 55 5999999***************************************999988765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51141	14.973	1	54	IPR004333	Transcription factor, SBP-box
Pfam	PF03110	2.9E-14	1	53	IPR004333	Transcription factor, SBP-box
SuperFamily	SSF103612	1.57E-11	2	55	IPR004333	Transcription factor, SBP-box
Gene3D	G3DSA:4.10.1100.10	6.4E-12	2	41	IPR004333	Transcription factor, SBP-box

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence Send to blast
MCAGHLLSPA VLKDGRLQRF CQQCCKLQDL DQFDGTKRSC RVALEKVRQR GRQRMQQLRS 60 PEDRRGGGPA QGGQATHSAQ EALMSTDAAF DGGVGISLPD EELDAGGGGG GGAQLPAASG 120 VLRWLQAHAQ ARVQPAGHVQ QSGQQQAGLL GAAGEGLPGP WPPPPPPPVA LGTSGQAGAG 180 AGAGAGAEQL LDGGGGGASP AELALAQWPP LQLQLQRAAL GNGGGGGAVN AGGDMGAAEL 240 LGPALRRGAQ QLGPLPSAAA ATAAARSGQG LGGHDEAGRV AEALQAALAT AGGGGGGQLP 300 AAIRNSLVPL LASLPAVQLS LLASAYTPAS APPLVPLPPL QLSSAAAAAA REGCSLDLSQ 360 PPPSRPLPPP ASALEPTGRG GFGIGIGGDG SHSLLQAAAA TAAAGGGDNP DGDGPDGGRP 420 LRLIATQHGG GPPPLLLAPW GRAAGRLGEA DAPPGPGAPL LPALPTLTLG LAAPGAANAA 480 AAANGDRPAI THRPLRPSLV LDAPAASPMR PPRGAQAEPA ENGDPAAQRD RGPHARGQAS 540 AAALSQLQAL LVSLGSNAGG GGGGAAGGGG LLGAGAPLGG GGGGERSAHR ANGCANDRAN 600 GHANGHTNGH ANGHGSMHAN GHANGHANGS NKWDWPRSED GAEDGGQVLE QREESYGACE 660 EDEDEVQGEG EEVAGRDGHA WLGRGRGPAP RVGTRRRRSQ SSREREDADA SQALLALQSS 720 VPGGVGGTGG GRRRLRA

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence Send to blast

MCAGHLLSPA VLKDGRLQRF CQQCCKLQDL DQFDGTKRSC RVALEKVRQR GRQRMQQLRS  60
PEDRRGGGPA QGGQATHSAQ EALMSTDAAF DGGVGISLPD EELDAGGGGG GGAQLPAASG  120
VLRWLQAHAQ ARVQPAGHVQ QSGQQQAGLL GAAGEGLPGP WPPPPPPPVA LGTSGQAGAG  180
AGAGAGAEQL LDGGGGGASP AELALAQWPP LQLQLQRAAL GNGGGGGAVN AGGDMGAAEL  240
LGPALRRGAQ QLGPLPSAAA ATAAARSGQG LGGHDEAGRV AEALQAALAT AGGGGGGQLP  300
AAIRNSLVPL LASLPAVQLS LLASAYTPAS APPLVPLPPL QLSSAAAAAA REGCSLDLSQ  360
PPPSRPLPPP ASALEPTGRG GFGIGIGGDG SHSLLQAAAA TAAAGGGDNP DGDGPDGGRP  420
LRLIATQHGG GPPPLLLAPW GRAAGRLGEA DAPPGPGAPL LPALPTLTLG LAAPGAANAA  480
AAANGDRPAI THRPLRPSLV LDAPAASPMR PPRGAQAEPA ENGDPAAQRD RGPHARGQAS  540
AAALSQLQAL LVSLGSNAGG GGGGAAGGGG LLGAGAPLGG GGGGERSAHR ANGCANDRAN  600
GHANGHTNGH ANGHGSMHAN GHANGHANGS NKWDWPRSED GAEDGGQVLE QREESYGACE  660
EDEDEVQGEG EEVAGRDGHA WLGRGRGPAP RVGTRRRRSQ SSREREDADA SQALLALQSS  720
VPGGVGGTGG GRRRLRA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150GZK1	0.0	A0A150GZK1_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP20	12	101