PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ54120.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C2H2
Protein Properties Length: 318aa    MW: 30361.5 Da    PI: 11.733
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ54120.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.46e-06259278120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C+ C+++F+++ +L++H 
  KXZ54120.1 259 FRCHTCPRTFNDPVMLVQHS 278
                 89*****************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.46E-6149174No hitNo description
SMARTSM003550.081151174IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.058151179IPR007087Zinc finger, C2H2
PROSITE patternPS000280153174IPR007087Zinc finger, C2H2
SuperFamilySSF576673.46E-6254277No hitNo description
SMARTSM0035539259279IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MPKPRTFFAL ATNRQTRSTV LSGGTAAALG IGRNNAGPAA AASGSPVAAA AAIRAAASRS  60
RPEAQREDPA NTLHGTAARR IAAASAAQAQ SSSQPSWWRW QQQPQQQPPP PQPGGPATAT  120
GGSGGAGRGG GGGSASGGSN ANPLVPPHRP EQCPQCGASF ATVERLIQHV EDFHPSGPSA  180
ARGASSPIDL TASSPAAAAP AAGTGMFANP LQGILQGTIA GGPAPGSGAA GGSGAGGMLG  240
LVGGGGGTAA APGRGGEVFR CHTCPRTFND PVMLVQHSEQ CAAAAARAGL AGGGSSGRGG  300
GAGGSGRGGG AKDGCRVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GXM20.0A0A150GXM2_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP481244