PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KXZ52497.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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Family | bHLH | ||||||||
Protein Properties | Length: 183aa MW: 19870.4 Da PI: 5.9535 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.2 | 8.2e-05 | 29 | 69 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 ++ + +e L+e l +++ a+++K l+ a+ L+kA +YI +L KXZ52497.1 29 ELQQEIESLKEQLASSTEAGNRKhLELAAGLKKAQDYIGQL 69 677889*********889999999**************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MRAESEAPGC DKLEAVDQGP KRQHKLHAEL QQEIESLKEQ LASSTEAGNR KHLELAAGLK 60 KAQDYIGQLI SERKHVDAKF YEMKADLITR LQNACAQRDE ARGNVMTLEA DLAKLHESLE 120 AKDRELAAAR AMAGMIGAMY VTAASSPATQ QAIGTPAPAA SAVDGDIEDM LQQLQNRHSP 180 IKG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002954496.1 | 3e-36 | type XI myosin heavy chain MyoA | ||||
TrEMBL | A0A150GRQ4 | 1e-130 | A0A150GRQ4_GONPE; Uncharacterized protein | ||||
STRING | XP_002954496.1 | 1e-35 | (Volvox carteri) |