PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ51003.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family MYB
Protein Properties Length: 1722aa    MW: 172934 Da    PI: 5.8361
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ51003.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-17430474248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g+WT+eEde+l++a+  lG + Wk +a++++ gRt+ qc++r+ ++l
       KXZ51003.1 430 GKWTPEEDERLKQAIDDLGQK-WKEVAARVP-GRTARQCRERYVNLL 474
                      79*******************.*********.***********9986 PP
2Myb_DNA-binding26.91.1e-08481522240
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqc 40 
                      g++++ E+ellv a+k++        W+++a++++ gRt+ qc
       KXZ51003.1 481 GPFSEAEQELLVAACKEHQAAygriIWSRVAERLP-GRTDDQC 522
                      79*****************99**************.******* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0071741308389IPR001005SANT/Myb domain
PROSITE profilePS500904.031354387IPR017877Myb-like domain
PROSITE profilePS5129423.066424478IPR017930Myb domain
SuperFamilySSF466892.49E-19427524IPR009057Homeodomain-like
SMARTSM007172.3E-16428476IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.8E-21430481IPR009057Homeodomain-like
PfamPF002495.0E-16430474IPR001005SANT/Myb domain
CDDcd001676.64E-13431474No hitNo description
PROSITE profilePS500907.631475530IPR017877Myb-like domain
SMARTSM007172.1E-5479532IPR001005SANT/Myb domain
PfamPF002497.1E-6481522IPR001005SANT/Myb domain
CDDcd001672.00E-7482522No hitNo description
Gene3DG3DSA:1.10.10.601.1E-10482530IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1722 aa     Download sequence    Send to blast
MDDAEDEEDY FAGLDALLAK QNELAWLVGR SVTVSPALVA WQPAEHARVL GPTVRHPSAD  60
AGDDEADVAA ATHGDRSGEG EGGSEDAAED DVSEYVPSSE GEESELASED MATAEAAARR  120
VLEAELDIDR LAADGGAGGY GAGGLGSDAD AATDEEAPGD GPDADSGPEE GTDEEDDEGG  180
DLDSYVARPE GEQLPPGSRL ARLYAALDTN RALQRQLVSM LEKLDSHSDL SYTLERRVRE  240
QPVVSKPTNA EARALAMSRA AARATGAAPP AQPLQTSRFW RVGGLLPAPT AEWTRLAAAQ  300
QLPPRPYERV RWPHKSVDAL NRGLMLEVQA LLTRQPAPAP AQDVRPDSPE AVPLILQMDA  360
ASWERVAASQ RVGRSGAECA AYYRHNLRPG LQWPLEESRR LMELAEKYGR RHVRDRYHGV  420
MTAGGPRRVG KWTPEEDERL KQAIDDLGQK WKEVAARVPG RTARQCRERY VNLLKPGLKF  480
GPFSEAEQEL LVAACKEHQA AYGRIIWSRV AERLPGRTDD QCSRAYEGLV RHDKAHVGHK  540
RGGGSHMEDP THLAPQRAAR GGRGRGGSRG RGGSQGRGRA RKRQRRQSES SSGGESAEEE  600
ADNGKEDAEE EAGEAAEARQ EPGERQGAAE LEGRRLQPRR AAARRRAGAD VAPPGHGNEA  660
PGDGGSGDEA SLGGSDGGGG RRRRTGARVR AAAQADGDSS AASDGDANGG VAETATADPP  720
ASRRGGRAAA APPRQRQRRS AAAPAAAAEE HAEEAARPAG VEDGDTSEAD DELHILKEQI  780
LKLQRALEAL CGASPHAGPG AGSGAANCAG GATGGGAGGG AHLTAFAVPA LHAALWSAGS  840
VAGAGGIGGA GGGSLTPAPS VGSSSSSSAA GSGSSSVFSA GNSSAAAAAA EAQGKLEAAA  900
AREAAARREA EAADAARRRG EAEADALRRR LTEAEAAMAS ARRDAAAAVD GGDRKLAELA  960
ARISHLDAEV KRLTGELAAA RAEAVAAAAV VAQREKDMAA LQAEKLEAVA RLASSQHDLE  1020
SERRRLGEEL AATEVLRNQL MADANAVRAL GALTQAKTLR LDIGGGALAA SASASAGGGA  1080
AAGGGRPMTG DPAAHVRLSN LVKEQQAQLV ELGDKLAARE QRCGNLQVAL TAAQEKLAER  1140
EVAARESAAA TAAREVQLTS QMRELQFGEL SRHSDSLRSH NAELQAAAER GQREAAEATA  1200
AAAAARAALA AAEQQLSAER AHRERLLGQL VDAAAARDAA ASDAATLGAQ QRADTSRLAE  1260
LQAALLLAAQ KLAGAERTIT GQDERIAALQ ARVRAAEERL AALGVALPPD DADGPPQQMA  1320
LRPLSGGGAG SPGGGMQHLL AALSRADGEP TAAAPAGAAP PPRLSSLLAG GGLTLGSLAH  1380
DSKALGALVQ DVIARVAAEA GGGLAVPGGG GSGGRAATAA AANGARSGSS RVPQGRASPV  1440
PEPEPRGGGG AGMPNRASAP RMVLRPSSAS VVGKVQEHPT PSGLPGVGRL SLAPGGGGGG  1500
GGSGGGAWAS GFLGSMGAGG GGGGRPHSAW PQRGGAAWSG TGAATAAASA AVAGGGGGGG  1560
PPGAGTAGMW PSAASSGLAA VRRVNSGGNG QASLAPVSGT SAAAAAGGVG GGGSSGLRLL  1620
AEAEALASAA APAAALATGA GADGGGLPAR LGATGSFGRG SAAARLMMGA GGSAAGGGGG  1680
PPSGRPGTAL SKKTVLLLST SSPSGGAQLG DALALDDDWQ PV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3osf_A3e-174315191396MYB21
3osf_D3e-174315191396MYB21
3osg_A3e-174315191396MYB21
3osg_D3e-174315191396MYB21
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1575583GRGRARKRQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GMD90.0A0A150GMD9_GONPE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.23e-23myb domain protein 4r1