PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ49173.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family E2F/DP
Protein Properties Length: 619aa    MW: 63881.6 Da    PI: 8.6054
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ49173.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP54.42.1e-1728103471
     E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse..........dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                  +Lr ++ k   ++e+ ++  ++t+n va+eLv+e          d k +rRR YD++NVL a +li++ +k+++ w+g
  KXZ49173.1  28 GGLRFFSLK---VVERIRSrAKTTYNAVAQELVQElngelgvaikDGKSIRRRCYDAINVLLAAGLIKRDDKKQVVWRG 103
                 589999999...6666555599***********************9999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM013722.7E-1725103IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene3DG3DSA:1.10.10.103.3E-2225105IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.63E-1228104IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF023195.0E-1628103IPR003316E2F/DP family, winged-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MGSDSKLVKK GSRNRAAVGR SGASGTAGGL RFFSLKVVER IRSRAKTTYN AVAQELVQEL  60
NGELGVAIKD GKSIRRRCYD AINVLLAAGL IKRDDKKQVV WRGHGSVELD RLQAELENRQ  120
REVERKALLL QARSSAGLKL HVSEDRSCVE FQLPEQPLLL HDGIDVLLQL HQLHAERGGP  180
GRASAGQPPA VAAASDGAAS PAAAPGRQDQ DHYQEQALPQ PEAAARLGPL PLPCRGTAAP  240
GCAPARPGRF KTRKARQLKL GRQALAQALS SEGWVAVKEE PSAQPTGPAA GPSFAEPSHV  300
LATAESLDPA LGADWRANGL PPLMLPSLTD AALAFLHGCP ALPSGLCVED VGFGPASLPW  360
LDSGGSCVPP AAGPAGGGVA APSLQLQPPV PFPRPGSADS LFNSSGGLLG ATRAQGSAAT  420
AATEVAIAEA AIPRSLQQQQ QTGVSGFNSL AGPQPPPCLA VPLEQLCDED ARQYMPPSSW  480
DLDDDAADPL GLSLAGDDMA TWGWSFRLGL DAPSLRKASP RKSGPGQLIG GSPRKPLPGS  540
VMSVSPFKAG AAFCSSPSKL GPGPGPFLVA GSPCKAAGLG QFLSASPCKS VPSQFLSGQC  600
RRDPGLQPAS APVSLGMQL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GHA40.0A0A150GHA4_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP15991417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.12e-21Transcription factor DP