PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ48165.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

GATA

Protein Properties

Length: 1367aa MW: 140824 Da PI: 9.4644

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ48165.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	44.9	1.6e-14	563	596	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 CsnCgtt+TplWR++ d t CnaCG+y +++g KXZ48165.1 563 CSNCGTTQTPLWRKDRDTGETMCNACGIYKQSHG 596 **************77777******99997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00401	9.1E-13	557	608	IPR000679	Zinc finger, GATA-type
PROSITE profile	PS50114	19.639	557	614	IPR000679	Zinc finger, GATA-type
SuperFamily	SSF57716	1.62E-13	557	609	No hit	No description
Gene3D	G3DSA:3.30.50.10	3.6E-18	558	605	IPR013088	Zinc finger, NHR/GATA-type
CDD	cd00202	2.57E-18	562	616	No hit	No description
Pfam	PF00320	1.2E-12	563	596	IPR000679	Zinc finger, GATA-type
PROSITE pattern	PS00344	0	563	588	IPR000679	Zinc finger, GATA-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1367 aa Download sequence Send to blast
MCRPVELIRA SLNHVARRAF GKSDTGSGGG EGSRARTLAA QVTRKSVRKR QASRTRFDHE 60 EEVDGRPHPL SAPVAKFPRL GVTGEGPSPS QQRLLRYGAA GQALPLRLPA GALLGPHANS 120 EALQAAARLV GAVGLMLPFT TAVGGPQHAA GLGLAAQGHY AYLSPSDEDH EAGARADDGA 180 ADDPDDEWVG PPPAHAQRQR AGGGSTADGG EPRGDSDSGE EGPPSPANGD GPPLAVDDDS 240 EAVARILLRM HHCVYSLGPK RLGLDGGDDG AGAVAATTGA AASRDAKGGD AAAMAAATAA 300 QEKLQSLLES EAAAAVRGNH LAYLAALQQA RGMAALQAGA SGQPKAEALE KAKGAAQINV 360 LNLLARLKAQ EAAIAQGQPP GVKEEAARGL VSPEQDSAGA RLPSQDGTAG AVRTQPGPDG 420 RVLLLFPMDG REQLKDAAAG AGGSGGAGQH PPRLVPLPGP GQWTSARPAS TGSVPEYAAR 480 EQASVAQSPT GSAPSAGARG AGDEQRGLAR SSEASGGAGQ GLHAGPRQPF SQHLSGQQSG 540 DTSGRGMPPP PKPPRNHKGP LQCSNCGTTQ TPLWRKDRDT GETMCNACGI YKQSHGFNRP 600 VGGRQSVPQP VVKRFPVARP VGAQPVRSNQ PARPGTVQDA AAPAKPAASA AGGAPLRQLP 660 LAAAAAAALS GSAALGRAGV LAAPGIGGAA EELRAALELL SRGSEVPLGS VASDASARSA 720 TAATSGRSDG LGLGNGAGSS PRRADLQMGQ VGQAAGASSP GPEPGWRPSP RPHAGGSDSS 780 GADFEAAQRS PPHSSYPVTG VAQMVQEQSK AASEDQQESS RQRLPQQQQQ RGLEGADRPA 840 DQQAARKSVG EDGRGSPLHG LLSDALRRQA AEVLGMQQHA QQQLNQQQHQ QQHHLQQQQQ 900 QQQAQQQADA RRREREQREL EAEHDADRDA LRRQHLLQQQ ARVLLQLKAA ESAAAAQLQE 960 HVCGGAAPAA PSAAPHAAGP RGSDGAAAGD STRSSGSAAP AVQRPFRLDL SGAEPPLPSG 1020 TGGGVVGSGG AARASGEQRG RGGARSDEDA GGEDGGVLPY LLARLTQQGQ EFRSAQVQRE 1080 RMLLQQHQQQ QQRQAAQHQQ EQQQLQQQRR ERDEGLAPLA AQQQHINAAE QQLLMMLIKQ 1140 RQQQQQQQQQ HLQQERELAE VQQHLLHRQE QAAAAGSGAG VGGLGGLGGG DHPLTRGNAD 1200 AEARVLGGAE GAPGSPPFAL RQLQRPQSSA AAGPAHHETL PQRQPLAQES HRPQTGPHVH 1260 PLQQQSHHHL PHRSDGARQP QAQSLPQQGQ QPRTQKHVSR SGTVVVTAGS GAAQQRLQQQ 1320 SGQGQGPRAS GQQQQVNDAE ARVLGILRAA GIDLSGLGRA ATAAAGW

Sequence ? help Back to Top

Protein Sequence Length: 1367 aa Download sequence Send to blast

MCRPVELIRA SLNHVARRAF GKSDTGSGGG EGSRARTLAA QVTRKSVRKR QASRTRFDHE  60
EEVDGRPHPL SAPVAKFPRL GVTGEGPSPS QQRLLRYGAA GQALPLRLPA GALLGPHANS  120
EALQAAARLV GAVGLMLPFT TAVGGPQHAA GLGLAAQGHY AYLSPSDEDH EAGARADDGA  180
ADDPDDEWVG PPPAHAQRQR AGGGSTADGG EPRGDSDSGE EGPPSPANGD GPPLAVDDDS  240
EAVARILLRM HHCVYSLGPK RLGLDGGDDG AGAVAATTGA AASRDAKGGD AAAMAAATAA  300
QEKLQSLLES EAAAAVRGNH LAYLAALQQA RGMAALQAGA SGQPKAEALE KAKGAAQINV  360
LNLLARLKAQ EAAIAQGQPP GVKEEAARGL VSPEQDSAGA RLPSQDGTAG AVRTQPGPDG  420
RVLLLFPMDG REQLKDAAAG AGGSGGAGQH PPRLVPLPGP GQWTSARPAS TGSVPEYAAR  480
EQASVAQSPT GSAPSAGARG AGDEQRGLAR SSEASGGAGQ GLHAGPRQPF SQHLSGQQSG  540
DTSGRGMPPP PKPPRNHKGP LQCSNCGTTQ TPLWRKDRDT GETMCNACGI YKQSHGFNRP  600
VGGRQSVPQP VVKRFPVARP VGAQPVRSNQ PARPGTVQDA AAPAKPAASA AGGAPLRQLP  660
LAAAAAAALS GSAALGRAGV LAAPGIGGAA EELRAALELL SRGSEVPLGS VASDASARSA  720
TAATSGRSDG LGLGNGAGSS PRRADLQMGQ VGQAAGASSP GPEPGWRPSP RPHAGGSDSS  780
GADFEAAQRS PPHSSYPVTG VAQMVQEQSK AASEDQQESS RQRLPQQQQQ RGLEGADRPA  840
DQQAARKSVG EDGRGSPLHG LLSDALRRQA AEVLGMQQHA QQQLNQQQHQ QQHHLQQQQQ  900
QQQAQQQADA RRREREQREL EAEHDADRDA LRRQHLLQQQ ARVLLQLKAA ESAAAAQLQE  960
HVCGGAAPAA PSAAPHAAGP RGSDGAAAGD STRSSGSAAP AVQRPFRLDL SGAEPPLPSG  1020
TGGGVVGSGG AARASGEQRG RGGARSDEDA GGEDGGVLPY LLARLTQQGQ EFRSAQVQRE  1080
RMLLQQHQQQ QQRQAAQHQQ EQQQLQQQRR ERDEGLAPLA AQQQHINAAE QQLLMMLIKQ  1140
RQQQQQQQQQ HLQQERELAE VQQHLLHRQE QAAAAGSGAG VGGLGGLGGG DHPLTRGNAD  1200
AEARVLGGAE GAPGSPPFAL RQLQRPQSSA AAGPAHHETL PQRQPLAQES HRPQTGPHVH  1260
PLQQQSHHHL PHRSDGARQP QAQSLPQQGQ QPRTQKHVSR SGTVVVTAGS GAAQQRLQQQ  1320
SGQGQGPRAS GQQQQVNDAE ARVLGILRAA GIDLSGLGRA ATAAAGW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150GF15	0.0	A0A150GF15_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP4830	8	10