PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ47731.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family ERF
Protein Properties Length: 831aa    MW: 82923.5 Da    PI: 6.1537
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ47731.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-20275323355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+W+AeIrdp     +  +r +lg+f+taeeAa+a++aa+++++g
  KXZ47731.1 275 YRGVRQRP-WGKWAAEIRDP-----TvgARRWLGTFDTAEEAARAYDAAARAIRG 323
                 9*******.**********9.....4459***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.538274331IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-31274333IPR001471AP2/ERF domain
SMARTSM003809.6E-38274337IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-22274333IPR016177DNA-binding domain
PfamPF008471.4E-12275323IPR001471AP2/ERF domain
CDDcd000181.62E-18275333No hitNo description
PRINTSPR003671.2E-10275286IPR001471AP2/ERF domain
PRINTSPR003671.2E-10297313IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 831 aa     Download sequence    Send to blast
MQALATAQAA LQAAQAQMAA AAAAAAAAAA GQVQNQAAAG QAGQGQPAQI QAQLQAQANF  60
QAQLVAAQHL RNAAAAAAAA GQQAAQAQAA QAQAAAQQAA AQQAAAQQAA AQQAAAQAQQ  120
ALQAQQQAQL EAQQQAFQAQ QEALQAQQLQ QLQQLHAQQL QQLQQMQEAQ EAQEAQAAQE  180
AQEAQAAQEA EQLQQLQFQQ FQQMQAQMGQ LPMPMGPMGV PLHQVQMPML PEEEESSEES  240
EGDTASPRKR REKKKTHRGG GGGDDVVSKG KNKTYRGVRQ RPWGKWAAEI RDPTVGARRW  300
LGTFDTAEEA ARAYDAAARA IRGPAARCNF PLSANDDYHP GHHHHHHHHH AAAAQEAAAA  360
GGMMGGGGQG HKGGMGMGPG GPGSGSGSIG DPSQLEMMGG LGMPPPGGPE EAAAAAAAAG  420
LAPPPEQPRG KPHVGLRLKQ KGPRTAVKRS GMDDPLIQSS MHGGLGAADI HGAMSVNDAM  480
AAAGGPMAGP MMGGMPALNG GSPSSFPHMK VKTGLTPNFS GWHGPVPSHL PAGTPSSGMM  540
LLPEWPPAGS IGSASMMMLG MSPGAGEMGV SYGNTYGKSV DMLDMCAQLM EAGVDPLATI  600
GSLRNELMLP PDFKVGSIDA AGVDGELDEQ EVHELDEMMI LGSTPPFGRM STDAFFRSPG  660
LPHGFPVGGI FGSGSSAAAS AGLVAAAAGM RVSGGAIGNG GGPAGSGGAG GAAGGSGGAG  720
GAFGSRGGSP ASDGAGGVAL PGIAGSAGLG MFPQLIPADP LLGMGRLSDG FGNFLRQQQA  780
IKGALAAAAA GGGGDAGASG GSGGSPGRDS GTGELPHVLS LGAPLGSEGR S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-20271335267ATERF1
3gcc_A2e-20271335267ATERF1
5wx9_A6e-202753351576Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247252RKRREK
2252256KKKTH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GD000.0A0A150GD00_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.16e-14ERF family protein