PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ46891.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family MYB
Protein Properties Length: 1018aa    MW: 105294 Da    PI: 6.1727
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ46891.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-13642683145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +g +T eEd +l+++v+q+G + Wk I  ++g  R ++qc++rw+
       KXZ46891.1 642 KGHFTDEEDRRLLELVEQHGRK-WKVIGTELG--RLPEQCRDRWR 683
                      689*****************99.********8..999*******8 PP
2Myb_DNA-binding27.19.8e-09694808246
                      SSS-HHHHHHHHHHHHHTTTT.......................................................................-H CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg.......................................................................tW 24 
                      g+W++eE e+l + v+ +  +                                                                       +W
       KXZ46891.1 694 GPWSKEEMERLQEIVQDHLENkhraeaavdqgiaaaanaamaaeaaaaaasaaaagpgngspagaagaggaggskpalragaasrrivldgiNW 787
                      89****************9999************************************************************************ PP

                      HHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  25 ktIartmgkgRtlkqcksrwqk 46 
                      ++Ia++m  +R + qck++w++
       KXZ46891.1 788 EAIASKMV-TRNPQQCKEKWYD 808
                      ********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0071741568638IPR001005SANT/Myb domain
SuperFamilySSF466893.14E-14616684IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-13635684IPR009057Homeodomain-like
PROSITE profilePS5129417.963637690IPR017930Myb domain
SMARTSM007174.6E-11641688IPR001005SANT/Myb domain
PfamPF139211.2E-16645704No hitNo description
CDDcd001672.66E-9645683No hitNo description
PROSITE profilePS500906.69688810IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.604.9E-15688711IPR009057Homeodomain-like
SMARTSM007173.7E-9692812IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.9E-15784815IPR009057Homeodomain-like
CDDcd001678.67E-5785807No hitNo description
SuperFamilySSF466898.07E-12790874IPR009057Homeodomain-like
PROSITE profilePS500907.515812865IPR017877Myb-like domain
SMARTSM0071712816867IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1018 aa     Download sequence    Send to blast
MEHAQAAIQQ AQAALEQMSS MERVLVQGVN DGAMDAGGSH VDGGHLSAED QQRLAMAATQ  60
SLQSLLPLHG DDPAAAHMHL AGIMQHAMQV MEHQHALNQG MGMQPDELAA HHSAQAALIE  120
QAMALVALTP LAGTVPGLDA NGQSAYSSMP DATAAAAAAA AAAAVAAAAA VAGPQAALDQ  180
QQHHAGAEMH HHHHHHHHPK PPREHSRRKR AAETEMMDGS GRSGDRRTRK RSEKKRKRAE  240
RELQEAAVGD DDLEEEYEQV GIAAAAVAAA AKLARAQVAA AAAAAAAGTI NAPVPAGMSA  300
VMPTQQQERP EDSGATAAAA AAADVTDTGA HDGMSMDGDD SYRSQAQSLV AALLAAAAPA  360
AGSGGYQGMG AYPGVPQLST LPQQPGDVSQ LDAQAMAAAA AAAAAAATAA PQMSGLPLGL  420
FGSGASQLMA PGVPGAYGAM VSEASGGLEE LQDQVAMQGG GSEDHLQQHG AAAAEEAAAV  480
AAAAAQAAHD QQQAAHAHAQ AQAGSELQQL QMPMQVQMHG AQGQGAQPQP QQPAMEPLVG  540
EAPKPQRGGP KRMTQMSWNE DLQRTDVKSG PFSQAESDAA KDAARRYAQA HGKSCTDWSW  600
MFSLQREGMH GMITMISTAV PHRTRKSLWA HLTRVLHSGN YKGHFTDEED RRLLELVEQH  660
GRKWKVIGTE LGRLPEQCRD RWRHIGINQQ RTTGPWSKEE MERLQEIVQD HLENKHRAEA  720
AVDQGIAAAA NAAMAAEAAA AAASAAAAGP GNGSPAGAAG AGGAGGSKPA LRAGAASRRI  780
VLDGINWEAI ASKMVTRNPQ QCKEKWYDAL CPSMVSRGEW GPGDDKRMLR SLLLSGASRE  840
WEVQWDSLVE GRTALQCKRR WRLMLKCVPD HRNMEFDAVL QFLVDKYAPK LRNLQAQQQT  900
DQMFAAAQQE QLQHILMQGM GLGMAPPGGD AGGVDGGLGG GHMGMDAQQQ HAAVAAAAAA  960
LAGGSGGVLG LPGLDGGHHL GDQGMFAAAA AAAAVAAAAA GGLMEDAGGG LGAGAVEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225231RRTRKRS
2229236KRSEKKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002952373.10.0hypothetical protein VOLCADRAFT_105501
TrEMBLA0A150GAL70.0A0A150GAL7_GONPE; Uncharacterized protein
STRINGXP_002952373.10.0(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP23271315
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.16e-16MYB_related family protein