PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KXZ46020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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Family | B3 | ||||||||
Protein Properties | Length: 106aa MW: 11681.6 Da PI: 8.4995 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.4 | 9e-12 | 15 | 98 | 2 | 86 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +k+lt +d ++s+ + lp+ a+ + ++ +++s l+l de g We+ + + ++g+y l+ F++a+g++ g f++F+ d+ KXZ46020.1 15 VKKLTVNDGFTSKSVKLPRAEARFFmgELRNRQSLSLVLLDEAGGCWELLC--TCTGGQYALS-RVGAFCEAHGVRPGAFFIFYADH 98 699999****************9999988899*******************..8888999999.89******************665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.0E-6 | 10 | 99 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 7.26E-8 | 11 | 100 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.84E-8 | 13 | 105 | No hit | No description |
Pfam | PF02362 | 4.4E-8 | 15 | 98 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence Send to blast |
MSSHVIANAK RYLCVKKLTV NDGFTSKSVK LPRAEARFFM GELRNRQSLS LVLLDEAGGC 60 WELLCTCTGG QYALSRVGAF CEAHGVRPGA FFIFYADHEH IVIVVG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A150G9J4 | 5e-73 | A0A150G9J4_GONPE; Uncharacterized protein |