PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ45172.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C2H2
Protein Properties Length: 300aa    MW: 32171.8 Da    PI: 6.0242
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ45172.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018174198123
                 EEETTTTEEESSHHHHHHHHHH..T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                 + C+ C+k + +  +L+ H+++  H
  KXZ45172.1 174 FYCEVCDKQYVSARQLEEHLSSydH 198
                 79*****************998665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004439.5E-1773120IPR000467G-patch domain
PROSITE profilePS5017416.9975122IPR000467G-patch domain
PfamPF015853.2E-1576118IPR000467G-patch domain
SuperFamilySSF576671.57E-7170206No hitNo description
PROSITE profilePS501579.058174203IPR007087Zinc finger, C2H2
PfamPF121711.1E-6174195IPR022755Zinc finger, double-stranded RNA binding
PROSITE patternPS000280176198IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MSANQQPAGV NTLTPLGVAV VDPRLAAPRG DEFTNAFVIS RQRGLDDDDD WARRPTADAD  60
AHEEEPGSSA APISSSNIGF KLLQKMGWKE GKGLGKQEDG RVEPVASGIE AGVRLGLGKQ  120
EEDDTHTAEA TAARKRLEIE VAAQEDEEAA RRREAVAEVL QKREEDVKEM LQTFYCEVCD  180
KQYVSARQLE EHLSSYDHHH RKRLAETKAA MAERNRSDRQ RREQKVADKE MARLRKAGIS  240
FGLGGGGPGR GGLAAGRGGA LARGGIKRPG APVGLGGRPG KAAAVPMAGF GLDSDDEEGS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001693361.16e-88hypothetical protein CHLREDRAFT_147577
TrEMBLA0A150G5P40.0A0A150G5P4_GONPE; Uncharacterized protein
STRINGEDP033872e-87(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP564266