PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ44763.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C3H
Protein Properties Length: 512aa    MW: 50328.7 Da    PI: 4.3877
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ44763.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.39.9e-07369390527
                 --SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                 +Cr+++  G C+yGd C ++H+p
  KXZ44763.1 369 PCRYWRL-GRCSYGDACIYSHDP 390
                 7******.*************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010313.122335362IPR000571Zinc finger, CCCH-type
SMARTSM003560.028336361IPR000571Zinc finger, CCCH-type
SMARTSM003566.5E-5364390IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.727364391IPR000571Zinc finger, CCCH-type
SuperFamilySSF902292.22E-5367389IPR000571Zinc finger, CCCH-type
PfamPF006422.0E-4369390IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.106.4E-5369390IPR000571Zinc finger, CCCH-type
SMARTSM003569.3391417IPR000571Zinc finger, CCCH-type
PROSITE profilePS501038.831395418IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MPSGGGGCLD ASPPQPSAAE VAGEVDALFA RFAEAKGAAT DEQRPGGMDL DAAAEAAEGM  60
AASGEVEEDV MAETVAGAGQ EMTGGGGSQP VDGAGAMAAA PVPQSPPRAG ELEAEERMLR  120
PIISVRPNRN LSAVSAVNVA SLVQLAVKRP SATATAANAA TAAATATAAA AAAAEEDAAV  180
PVPLLAGGYT GGVAAPSSTP ERGAAGGWAE DVAAGLGLRE EEPGQGNGDA SAGPGMAGAA  240
AAPAEATVAA AAALPHAAAG PVEAGTGDGT ATTELGAGDG DRGAPGAGGD ATAGGGGGGP  300
VEVGLYAEVK AFQRQQRKAR RLNGEAPSTR PVPEIREPPA CRFWRLGRCA KGAGCPFRHV  360
GQPATRLLPC RYWRLGRCSY GDACIYSHDP RTAEPCMQLL ETGTCANGPA CPLGHYPPQD  420
ADALRELFED AATRAAVQVQ ARPAGARATA APAEQQSAGA VTAALQAGGG AGWGVGGSVA  480
WAMAAGDNGD PGSLRPMQPV LQRAFNAGDE DF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150G4Q90.0A0A150G4Q9_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1135233